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IMGVR_UViG_2617271222_000001-2617271222-2619159560

Arc-Vir

IMGVR_UViG_2617271222_000001-2617271222-2619159560

Identity

Kingdom:
archaea

Quality

70.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-91
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 46.0 4.03e-01 70.3% 80.6%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 49.0 4.18e-01 79.7% 75.0%
1u5dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 49.0 4.37e-01 79.7% 88.9%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 49.0 4.62e-01 78.4% 84.3%
1v5uA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 50.0 4.35e-01 83.8% 82.1%
1pjxA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 55.0 3.52e-01 90.5% 25.5%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.65 47.0 4.42e-01 77.0% 98.9%
2mtzA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.65 44.0 3.80e-01 71.6% 94.1%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 48.0 4.15e-01 82.4% 99.2%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 4.22e-01 82.4% 84.3%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 53.0 3.46e-01 93.2% 30.4%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 4.24e-01 83.8% 81.7%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 4.25e-01 82.4% 88.0%
1w4tA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.61 41.0 3.13e-01 89.2% 28.7%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 43.0 3.88e-01 75.7% 99.1%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 4.01e-01 100.0% 82.4%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.61 44.0 4.23e-01 83.8% 66.3%
3e5zA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 53.0 3.57e-01 98.6% 45.9%
4xw3A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.60 50.0 3.76e-01 93.2% 74.7%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 47.0 4.15e-01 83.8% 80.4%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 3.90e-01 83.8% 89.1%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 53.0 3.33e-01 98.6% 34.2%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 53.0 3.52e-01 98.6% 36.6%
2dg1C00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 53.0 3.49e-01 100.0% 87.2%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.59 44.0 3.18e-01 79.7% 97.3%
3g4eA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 52.0 3.48e-01 98.6% 95.3%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 49.0 4.10e-01 90.5% 66.9%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 51.0 3.40e-01 97.3% 95.1%
2vseA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 41.0 3.39e-01 74.3% 99.3%
1w4vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 39.0 3.43e-01 70.3% 93.6%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 50.0 3.28e-01 97.3% 44.3%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 51.0 3.36e-01 100.0% 40.7%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 52.0 3.43e-01 100.0% 38.6%
3emxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 40.0 3.36e-01 71.6% 93.5%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 51.0 3.37e-01 100.0% 65.5%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 49.0 3.37e-01 98.6% 45.0%
4j56E00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 38.0 3.46e-01 70.3% 98.1%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 3.56e-01 95.9% 59.5%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 46.0 3.61e-01 94.6% 82.4%
4s39A02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.56 38.0 3.31e-01 70.3% 45.7%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.56 48.0 3.25e-01 97.3% 53.0%
6i1cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 38.0 3.38e-01 70.3% 99.1%
4dqaA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.44e-01 95.9% 84.8%
3d22A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 38.0 3.20e-01 70.3% 86.8%
1nw2A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 37.0 3.39e-01 70.3% 99.0%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 48.0 3.23e-01 100.0% 32.8%
3w9aA00 2.60.120.1160 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.38e-01 100.0% 51.1%
4q0yA00 2.60.40.4400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 43.0 3.56e-01 86.5% 51.1%
2x0qA04 1.10.510.40 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › 0.53 43.0 3.22e-01 89.2% 78.0%
5ykwA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 37.0 3.26e-01 70.3% 94.3%
1y9lA00 2.40.128.230 Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM 0.53 46.0 4.11e-01 100.0% 93.6%
5j7dC00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 37.0 3.30e-01 71.6% 100.0%
7mi4A02 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.53 43.0 4.35e-01 89.2% 93.2%
2sliA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 3.46e-01 100.0% 66.3%
4epkB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 45.0 2.98e-01 97.3% 39.7%
4emtA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.52 36.0 3.02e-01 73.0% 78.4%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3214213 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 53.0 4.78e-01 79.7% 91.0%
4396276 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 53.0 4.86e-01 83.8% 71.0%
4103748 2484.1.1.60 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G 0.68 52.0 4.69e-01 81.1% 70.0%
5048797 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.67 50.0 4.67e-01 81.1% 87.4%
3630369 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.64 48.0 3.96e-01 79.7% 60.0%
3212639 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.64 40.0 4.03e-01 82.4% 61.3%
3487656 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 47.0 4.40e-01 79.7% 83.2%
4634067 2484.1.1.60 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G 0.64 49.0 4.07e-01 83.8% 53.3%
3427234 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.64 47.0 3.28e-01 79.7% 23.7%
3424294 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 46.0 4.35e-01 77.0% 97.8%
3581945 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.63 40.0 4.37e-01 86.5% 78.3%
3909375 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.63 48.0 4.02e-01 83.8% 82.2%
3222053 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.63 53.0 3.89e-01 98.6% 44.4%
5032559 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 45.0 4.25e-01 75.7% 98.9%
3930104 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 52.0 3.55e-01 91.9% 49.6%
3172856 5.1.4.575 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30290 0.62 55.0 3.73e-01 100.0% 42.1%
3256971 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 56.0 3.55e-01 100.0% 43.3%
None 0.62 48.0 4.29e-01 83.8% 77.1%
3616213 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 56.0 3.72e-01 98.6% 44.4%
4073461 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.62 53.0 3.99e-01 98.6% 64.7%
3609520 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 50.0 4.62e-01 89.2% 100.0%
1447892 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.61 46.0 3.88e-01 81.1% 90.7%
4028659 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 43.0 4.21e-01 74.3% 85.0%
None 0.61 54.0 3.63e-01 98.6% 40.0%
7390 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.61 44.0 2.99e-01 83.8% 20.8%
3619880 5.1.3.140 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL, DUF5128 0.60 54.0 3.52e-01 98.6% 43.4%
None 0.60 46.0 3.88e-01 83.8% 84.6%
4425568 5.1.4.163 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vgb_lyase 0.60 53.0 3.55e-01 98.6% 38.0%
3419955 5.1.3.207 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40, NBCH_WD40 0.60 50.0 3.23e-01 91.9% 65.4%
3231483 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.60 51.0 3.84e-01 94.6% 61.1%
3995338 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 51.0 4.06e-01 97.3% 66.5%
4434299 5.1.4.163 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vgb_lyase 0.59 53.0 3.51e-01 100.0% 37.0%
4189109 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.59 34.0 4.06e-01 75.7% 86.0%
3392173 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 51.0 3.45e-01 98.6% 43.6%
3945385 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.58 44.0 3.33e-01 87.8% 32.8%
3166679 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 52.0 3.32e-01 100.0% 53.0%
5006697 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 51.0 3.34e-01 98.6% 34.1%
3785609 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.58 51.0 3.35e-01 100.0% 30.3%
3886970 5.1.4.130 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › AAA_16 0.57 50.0 2.93e-01 98.6% 23.5%
5000262 5.1.11.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_CGLA 0.57 51.0 3.20e-01 100.0% 25.3%
3717674 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.57 42.0 3.97e-01 82.4% 65.6%
3682129 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.56 48.0 3.17e-01 100.0% 38.1%
3482448 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 47.0 3.71e-01 100.0% 80.0%
3425282 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.56 38.0 3.29e-01 70.3% 87.5%
3506771 5.1.5.75 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.56 47.0 3.16e-01 100.0% 34.3%
3449073 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.55 37.0 3.15e-01 70.3% 84.6%
3298595 10.1.1.11 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.55 46.0 3.76e-01 100.0% 87.1%
2872794 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.54 36.0 3.54e-01 70.3% 63.0%
3938607 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.54 42.0 2.52e-01 90.5% 18.2%
3961651 4091.1.1.1 beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.53 41.0 3.73e-01 82.4% 86.0%
3824503 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.52 45.0 3.07e-01 97.3% 32.5%
5022781 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 41.0 2.68e-01 87.8% 50.7%
3655079 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.51 35.0 3.04e-01 71.6% 87.8%