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IMGVR_UViG_2622736425_000001-2622736425-2622828019
Arc-VirIMGVR_UViG_2622736425_000001-2622736425-2622828019
Identity
- Kingdom:
- archaea
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-166
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.52 | 22.0 | 2.68e-01 | 75.5% | 57.5% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 20.0 | 2.89e-01 | 84.0% | 76.0% |
| 5ds1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 23.0 | 3.05e-01 | 71.8% | 76.1% |
D2
high
residues 171-314
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.68 | 24.0 | 3.87e-01 | 87.5% | 83.9% |
| 1owwA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 33.0 | 4.07e-01 | 87.5% | 76.3% |
| 4p04A01 | 2.60.40.3100 | Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain | 0.64 | 34.0 | 3.94e-01 | 88.2% | 68.9% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.63 | 37.0 | 4.14e-01 | 88.9% | 73.3% |
| 3r8qA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 32.0 | 3.92e-01 | 87.5% | 76.1% |
| 6brbD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 32.0 | 4.00e-01 | 88.2% | 80.5% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.62 | 39.0 | 4.19e-01 | 91.0% | 72.4% |
| 5irbA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 32.0 | 3.72e-01 | 88.2% | 68.3% |
| 3tesA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 32.0 | 3.88e-01 | 88.9% | 75.5% |
| 3b83C00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 32.0 | 3.75e-01 | 88.2% | 71.7% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.61 | 31.0 | 3.69e-01 | 97.2% | 72.3% |
| 4jguA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 28.0 | 3.42e-01 | 86.8% | 66.3% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 31.0 | 3.68e-01 | 86.8% | 72.6% |
| 1va9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 34.0 | 3.73e-01 | 88.2% | 66.4% |
| 4m00A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 27.0 | 3.47e-01 | 86.8% | 72.1% |
| 1iarB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 32.0 | 3.88e-01 | 86.8% | 80.4% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.59 | 39.0 | 4.06e-01 | 88.9% | 72.5% |
| 3cu7A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.58 | 33.0 | 3.78e-01 | 87.5% | 74.5% |
| 3uc2A00 | 2.60.40.3340 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 | 0.57 | 32.0 | 3.48e-01 | 90.3% | 63.7% |
| 4aq1A02 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 30.0 | 3.64e-01 | 88.2% | 79.1% |
| 1x5hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 34.0 | 3.58e-01 | 95.8% | 64.4% |
| 7y8sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 32.0 | 3.75e-01 | 86.8% | 82.1% |
| 3up1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 32.0 | 3.67e-01 | 88.2% | 77.9% |
| 2oxgC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 30.0 | 3.55e-01 | 86.1% | 76.2% |
| 2pndA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 35.0 | 3.86e-01 | 88.2% | 79.8% |
| 1l9nA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 34.0 | 3.78e-01 | 88.2% | 79.8% |
| 2je8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.50e-01 | 86.1% | 76.4% |
| 5z1aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.40e-01 | 87.5% | 72.0% |
| 4kkpA01 | 2.60.40.3880 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 32.0 | 3.50e-01 | 86.8% | 74.2% |
| 1uunA01 | 2.60.40.1650 | Mainly Beta › Sandwich › Immunoglobulin-like › Porin MspA (Ig-like beta-sandwich domain) | 0.51 | 31.0 | 3.24e-01 | 86.8% | 64.4% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 29.0 | 3.10e-01 | 91.0% | 62.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033870 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.67 | 33.0 | 4.52e-01 | 86.8% | 92.0% |
| 3523304 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 34.0 | 3.96e-01 | 88.9% | 72.0% |
| 3534419 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 33.0 | 3.87e-01 | 88.2% | 72.0% |
| 4956238 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 37.0 | 4.26e-01 | 89.6% | 78.2% |
| 3255783 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.62 | 27.0 | 3.84e-01 | 72.9% | 84.3% |
| 4003742 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.62 | 34.0 | 3.87e-01 | 93.8% | 71.4% |
| 3542951 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 32.0 | 3.91e-01 | 88.2% | 78.9% |
| 3403049 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 32.0 | 3.90e-01 | 86.8% | 76.8% |
| 138727 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 33.0 | 3.88e-01 | 87.5% | 74.3% |
| 4393560 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.60 | 32.0 | 3.71e-01 | 86.8% | 72.0% |
| 4929441 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 32.0 | 3.69e-01 | 87.5% | 70.5% |
| 3882883 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.60 | 32.0 | 3.64e-01 | 87.5% | 67.3% |
| 3931864 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 33.0 | 3.69e-01 | 86.8% | 66.9% |
| 5064624 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 31.0 | 3.35e-01 | 88.9% | 59.2% |
| None | — | 0.58 | 34.0 | 2.33e-01 | 87.5% | 17.3% | |
| 3996627 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 34.0 | 3.75e-01 | 87.5% | 71.3% |
| 5044833 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 32.0 | 3.81e-01 | 87.5% | 79.0% |
| 4970004 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 34.0 | 3.91e-01 | 86.1% | 81.9% |
| 5046604 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 33.0 | 3.63e-01 | 88.2% | 71.3% |
| 1551 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 34.0 | 3.74e-01 | 98.6% | 72.3% |
| 3913545 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.56 | 36.0 | 3.95e-01 | 88.2% | 80.0% |
| 3528793 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.55 | 33.0 | 3.64e-01 | 86.8% | 72.2% |
| 4103142 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.54 | 30.0 | 3.98e-01 | 84.7% | 100.0% |
| 3237475 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.54 | 29.0 | 3.82e-01 | 84.7% | 96.2% |
| 2583136 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 40.0 | 3.70e-01 | 96.5% | 62.0% |
| 4956127 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 31.0 | 3.52e-01 | 86.8% | 77.1% |
| 5041931 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 32.0 | 3.53e-01 | 88.2% | 74.8% |
| 3567000 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 30.0 | 3.47e-01 | 88.9% | 77.1% |
| 2806788 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.52 | 31.0 | 3.43e-01 | 87.5% | 73.2% |
| 3514912 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.52 | 28.0 | 3.73e-01 | 77.1% | 100.0% |
| 1588 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.51 | 31.0 | 3.46e-01 | 86.1% | 77.5% |
D3
high
residues 319-465
Domain cluster:
rep: IMGVR_UViG_2622736425_000001-2622736425-2622828019__D4-166
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 19.0 | 2.68e-01 | 84.4% | 52.1% |
| 1oo0A00 | 3.30.1560.10 | Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi | 0.61 | 54.0 | 5.49e-01 | 95.9% | 97.9% |
| 3htxA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 22.0 | 3.01e-01 | 88.4% | 67.1% |
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.53 | 18.0 | 3.02e-01 | 98.0% | 100.0% |
| 3hn3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 26.0 | 3.13e-01 | 100.0% | 69.2% |
| 6lynD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 22.0 | 2.77e-01 | 99.3% | 64.4% |
| 1olzA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 24.0 | 2.99e-01 | 100.0% | 73.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4076804 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.73 | 19.0 | 3.14e-01 | 82.3% | 58.2% |
| 4926778 | 861.1.1.3 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › DUF6438 | 0.72 | 56.0 | 6.03e-01 | 95.9% | 95.9% |
| 3993443 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.68 | 20.0 | 2.79e-01 | 86.4% | 49.3% |
| 3293481 | 861.1.1.1 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › Mago_nashi | 0.65 | 53.0 | 5.68e-01 | 89.1% | 100.0% |
| 3598074 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 26.0 | 3.05e-01 | 91.2% | 50.5% |
| 3516347 | 861.1.1.1 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › Mago_nashi | 0.62 | 54.0 | 5.38e-01 | 93.9% | 94.8% |
| 3470076 | 861.1.1.0 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein | 0.62 | 55.0 | 5.63e-01 | 98.0% | 100.0% |
| 5059796 | 4326.1.1.0 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like | 0.59 | 27.0 | 3.96e-01 | 97.3% | 94.2% |
| 3636596 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 21.0 | 3.45e-01 | 87.1% | 92.0% |
| 3803892 | 376.1.2.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT | 0.57 | 22.0 | 3.22e-01 | 84.4% | 78.5% |
| 3701675 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 24.0 | 3.58e-01 | 91.2% | 89.7% |
| 3458064 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 21.0 | 3.39e-01 | 90.5% | 94.3% |
| 5081495 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 28.0 | 3.03e-01 | 92.5% | 55.8% |
| 4988831 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 18.0 | 2.87e-01 | 84.4% | 74.5% |
| 3887986 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 22.0 | 3.30e-01 | 100.0% | 93.3% |
| 3217379 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.52 | 24.0 | 2.89e-01 | 91.8% | 63.2% |
| 4991902 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.52 | 39.0 | 4.23e-01 | 92.5% | 94.2% |
| 3479397 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.52 | 33.0 | 3.79e-01 | 93.2% | 88.6% |
| 3438338 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.52 | 17.0 | 2.33e-01 | 81.6% | 50.7% |
D4
high
residues 472-631
Domain cluster:
rep: IMGVR_UViG_3300029737_000291-3300029737-Ga0245199_1046756__D8-91_103-130