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IMGVR_UViG_2627853753_000002-2627853753-2628824305

Arc-Vir

IMGVR_UViG_2627853753_000002-2627853753-2628824305

Identity

Kingdom:
archaea

Quality

65.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-88
PDB
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.71 60.0 5.96e-01 91.9% 93.3%
3i5tB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 46.0 3.71e-01 100.0% 39.0%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 42.0 2.85e-01 75.6% 35.9%
6t5kC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.58 41.0 3.07e-01 74.4% 32.6%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.58 46.0 4.22e-01 89.5% 99.2%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 41.0 4.01e-01 80.2% 69.1%
3ei3B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 3.23e-01 91.9% 94.6%
3w15A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 47.0 3.16e-01 91.9% 94.9%
1a48A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 47.0 4.35e-01 91.9% 90.1%
3rkxA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 49.0 3.80e-01 100.0% 54.0%
4j0wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 47.0 3.18e-01 93.0% 92.0%
3zqsA02 3.10.110.20 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › RWD domain-like 0.56 47.0 4.56e-01 94.2% 85.7%
2xzmR01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 46.0 3.12e-01 91.9% 93.3%
3jamg01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 46.0 3.17e-01 91.9% 93.2%
1erjB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 3.07e-01 91.9% 71.8%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.55 46.0 4.29e-01 93.0% 92.7%
2xu7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 45.0 2.96e-01 89.5% 88.1%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 3.11e-01 93.0% 91.5%
1wqwA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 47.0 3.74e-01 100.0% 47.6%
4nsxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 3.08e-01 93.0% 86.3%
1a0rB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 3.01e-01 91.9% 82.0%
3madA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 43.0 3.72e-01 100.0% 56.5%
4aezA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 3.16e-01 97.7% 52.5%
4j0xA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 2.89e-01 90.7% 90.7%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 2.92e-01 89.5% 36.6%
4ozuA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 3.04e-01 96.5% 88.8%
2hesX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 45.0 3.11e-01 96.5% 79.5%
2gzaA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 32.0 3.01e-01 90.7% 48.1%
8f5pC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 3.08e-01 95.3% 84.6%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.59e-01 88.4% 94.9%
3it5G00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.52 42.0 3.33e-01 88.4% 74.4%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 2.94e-01 93.0% 40.9%
6fcvB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.84e-01 91.9% 66.8%
4lg8A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 3.00e-01 94.2% 47.4%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 41.0 3.74e-01 88.4% 100.0%
1whzA00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.52 37.0 3.99e-01 97.7% 94.2%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 2.89e-01 94.2% 54.1%
1b8pA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.51 43.0 3.42e-01 90.7% 80.2%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 3.66e-01 94.2% 94.4%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 40.0 3.70e-01 89.5% 100.0%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.51 35.0 3.68e-01 97.7% 81.0%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.51 40.0 3.97e-01 84.9% 100.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4947558 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.74 55.0 5.50e-01 93.0% 75.6%
4944335 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.74 57.0 5.56e-01 93.0% 75.3%
3494266 331.4.1.5 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1_BRSK 0.72 62.0 5.53e-01 93.0% 90.0%
3490377 331.19.1.3 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › CPSF73-100_C 0.72 57.0 5.92e-01 95.3% 91.3%
3710689 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.71 64.0 6.07e-01 100.0% 84.0%
3686933 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.70 63.0 4.96e-01 100.0% 57.7%
3173084 331.1.1.13 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C 0.69 55.0 5.61e-01 100.0% 89.4%
3992359 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.69 60.0 5.77e-01 98.8% 83.0%
3479080 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.68 58.0 5.83e-01 93.0% 90.9%
5074928 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.67 47.0 5.23e-01 90.7% 96.9%
3781849 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.65 55.0 5.48e-01 97.7% 88.9%
4929392 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.65 45.0 4.49e-01 84.9% 70.0%
4181736 4041.1.1.0 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.64 49.0 3.99e-01 81.4% 93.9%
4346967 331.2.1.8 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C 0.63 52.0 5.20e-01 97.7% 86.7%
4084339 2011.1.1.18 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › AstE_AspA_cat 0.63 43.0 3.02e-01 70.9% 46.7%
5049624 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.63 53.0 5.16e-01 91.9% 87.4%
4483138 331.1.1.13 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C 0.62 54.0 5.20e-01 97.7% 86.0%
3587052 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.61 50.0 4.83e-01 88.4% 83.2%
4023063 216.1.1.8 a+b two layers › UBC-like › UBC-like › UBC-like › Knl1_RWD_C 0.60 45.0 4.43e-01 81.4% 77.9%
3929050 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.59 52.0 4.69e-01 95.3% 73.9%
3944588 241.1.1.9 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF3156 0.59 53.0 4.27e-01 100.0% 64.1%
4106394 241.2.1.6 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › PF26204 0.59 45.0 4.24e-01 83.7% 87.3%
3843096 5.1.5.76 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N 0.58 44.0 2.94e-01 80.2% 41.6%
4427813 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.58 49.0 4.58e-01 91.9% 93.3%
4244736 5.1.5.111 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40, Beta-prop_NOL10_N 0.58 43.0 2.95e-01 80.2% 42.9%
3246924 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 41.0 3.12e-01 75.6% 34.8%
3942564 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.57 44.0 3.04e-01 80.2% 47.2%
3739615 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 48.0 3.26e-01 91.9% 93.8%
3564856 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 43.0 2.92e-01 81.4% 41.5%
3619457 4099.1.1.11 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 0.57 44.0 3.80e-01 84.9% 72.1%
3417030 5.1.4.285 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_RIG_2nd 0.57 48.0 3.26e-01 93.0% 91.1%
3621408 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.56 42.0 2.81e-01 79.1% 32.9%
4987228 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 49.0 3.94e-01 97.7% 71.0%
4269649 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.55 47.0 4.35e-01 94.2% 90.9%
3965099 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.55 46.0 4.34e-01 91.9% 91.4%
3215471 5.1.4.382 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 0.55 46.0 3.01e-01 94.2% 51.1%
3926070 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 47.0 3.19e-01 97.7% 66.4%
3672189 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 41.0 2.62e-01 81.4% 30.7%
3512963 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 46.0 2.98e-01 93.0% 78.7%
3876703 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 46.0 3.02e-01 93.0% 91.9%
1176399 2011.1.1.18 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › AstE_AspA_cat 0.54 41.0 3.08e-01 80.2% 55.1%
3484119 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 45.0 3.08e-01 93.0% 87.2%
3502121 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 43.0 2.94e-01 86.0% 71.1%
3992334 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 46.0 3.20e-01 96.5% 78.4%
3620195 5.1.4.289 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, eIF2A, ANAPC4_WD40 0.54 43.0 3.01e-01 88.4% 85.7%
3734559 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 45.0 2.97e-01 96.5% 67.4%
4332532 5.1.4.309 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF29630 0.53 45.0 2.90e-01 94.2% 96.5%
3637442 5.1.4.254 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.53 42.0 2.75e-01 86.0% 83.2%
4029983 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 42.0 2.92e-01 89.5% 71.9%
3994644 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 43.0 2.51e-01 90.7% 33.9%
3268322 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.52 42.0 2.79e-01 88.4% 70.3%
3924970 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 42.0 2.87e-01 91.9% 83.2%
3517387 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 43.0 3.03e-01 93.0% 94.1%
3605311 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 43.0 2.92e-01 93.0% 59.7%
3168231 5.1.4.5 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,CAF1C_H4-bd 0.51 41.0 2.71e-01 89.5% 49.0%
3419029 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 43.0 2.97e-01 97.7% 68.7%
3793856 5.1.4.421 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.50 40.0 2.30e-01 84.9% 46.5%
D2 high residues 176-218
PDB