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IMGVR_UViG_2634166507_000001-2634166507-2635972831

Arc-Vir

Identity

Accession:: IMGVR_UViG_2634166507_000001-2634166507-2635972831 ↗
Kingdom:: archaea

Quality

76.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-51

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1d3bB00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.60	41.0	3.45e-01	97.6%	37.0%
7r5mA01	3.30.559.10	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain	0.60	46.0	3.00e-01	92.7%	85.2%
1yk9A00	3.30.70.1230	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain	0.59	43.0	2.92e-01	82.9%	41.3%
3pp9B00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.55	38.0	2.70e-01	80.5%	84.5%
3anzC00	2.70.240.10	Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA	0.54	40.0	2.45e-01	82.9%	43.2%
5xc5A00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.54	41.0	2.90e-01	92.7%	64.1%
1vwxP00	3.90.470.10	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17	0.53	36.0	2.59e-01	73.2%	96.7%
1uzxA00	3.10.110.10	Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme	0.52	38.0	2.74e-01	82.9%	62.1%
5f3bD00	2.10.90.10	Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines	0.52	37.0	2.99e-01	85.4%	88.3%
2gnnB00	2.10.90.10	Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines	0.52	37.0	2.97e-01	82.9%	70.5%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3606796	213.1.1.0 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat)	0.64	46.0	2.98e-01	82.9%	54.5%
3612888	304.31.1.0 ↗	a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase	0.60	46.0	3.45e-01	90.2%	73.3%
3602454	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.56	41.0	3.64e-01	92.7%	95.9%
5045876	304.51.1.7 ↗	a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6	0.54	43.0	3.09e-01	97.6%	92.4%
4946313	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	38.0	2.88e-01	80.5%	41.5%
5030848	242.1.1.0 ↗	a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases	0.53	40.0	2.97e-01	97.6%	63.4%
4843352	11.1.1.96 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set	0.52	35.0	3.58e-01	75.6%	88.1%
3450430	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.51	39.0	2.78e-01	100.0%	49.1%
3771736	385.1.1.1 ↗	few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › Cys_knot	0.51	34.0	2.97e-01	75.6%	90.0%
3664751	225.1.1.0 ↗	a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	0.50	37.0	3.07e-01	95.1%	59.0%