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IMGVR_UViG_2634166507_000001-2634166507-2635972856

Arc-Vir

IMGVR_UViG_2634166507_000001-2634166507-2635972856

Identity

Kingdom:
archaea

Quality

94.1 mean pLDDT

Cluster

View cluster (4 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-63
PDB
Domain cluster: rep: IMGVR_UViG_3300001682_000662-3300001682-SAHD_1000721816__D1-69
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10049.15 best DUF2283 67.0 1.80e-18 79.0% 98.0%
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oocA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.81 58.0 3.72e-01 75.8% 73.1%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.80 42.0 3.31e-01 100.0% 26.6%
3el6A00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.78 57.0 3.68e-01 77.4% 73.4%
5exvC00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.75 54.0 3.90e-01 75.8% 56.4%
6gmhH01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 52.0 3.91e-01 75.8% 70.1%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.72 49.0 3.31e-01 71.0% 93.9%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.71 51.0 3.94e-01 75.8% 63.8%
2gx9A00 3.30.420.330 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain 0.71 57.0 4.45e-01 87.1% 46.8%
2v3aA03 3.30.390.120 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.66 50.0 4.99e-01 82.3% 85.9%
4emiA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.66 54.0 4.78e-01 90.3% 63.7%
2w42B02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 47.0 3.15e-01 75.8% 64.5%
1u9tA02 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.65 53.0 3.84e-01 88.7% 79.9%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.64 47.0 3.59e-01 79.0% 94.3%
3mzkB01 6.20.50.30 Special › Other non-globular › N-terminal domain of TfIIb › 0.63 34.0 4.09e-01 87.1% 81.6%
4lxqB00 3.40.50.12230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 47.0 3.09e-01 82.3% 46.4%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 39.0 3.35e-01 100.0% 41.7%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 41.0 3.37e-01 72.6% 69.7%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 40.0 3.45e-01 71.0% 84.8%
5eliA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 4.03e-01 90.3% 76.8%
1q8mA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 3.95e-01 91.9% 87.6%
6mjjC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 4.02e-01 91.9% 93.0%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 41.0 2.64e-01 75.8% 100.0%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 39.0 3.59e-01 71.0% 77.9%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.58 41.0 3.59e-01 75.8% 51.0%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 39.0 3.28e-01 71.0% 84.7%
5d2lE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 45.0 3.86e-01 90.3% 75.0%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 38.0 3.35e-01 71.0% 73.5%
1nrkA01 3.30.70.1630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 47.0 4.12e-01 95.2% 72.2%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.25e-01 74.2% 71.8%
1bcoA02 2.30.30.130 Mainly Beta › Roll › SH3 type barrels. › Transposase, Mu, C-terminal 0.55 37.0 3.66e-01 71.0% 86.8%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.02e-01 74.2% 80.3%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.19e-01 74.2% 86.2%
2dkhA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.54 41.0 3.36e-01 80.6% 49.1%
5uaoC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 41.0 2.46e-01 83.9% 46.7%
4gouA02 2.30.29.200 Mainly Beta › Roll › PH-domain like › 0.53 36.0 2.84e-01 72.6% 93.0%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 36.0 2.96e-01 71.0% 76.4%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 38.0 3.25e-01 77.4% 66.7%
2a6hC05 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 34.0 3.28e-01 87.1% 53.3%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 38.0 3.21e-01 77.4% 79.8%
6y2kA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 37.0 4.11e-01 80.6% 92.0%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.98e-01 88.7% 84.6%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 36.0 3.19e-01 100.0% 45.2%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 32.0 3.21e-01 96.8% 58.2%
1skoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 37.0 3.08e-01 75.8% 77.6%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 40.0 2.52e-01 85.5% 17.3%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 38.0 2.39e-01 79.0% 89.1%
2f8xC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.80e-01 95.2% 88.3%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.50 35.0 3.44e-01 83.9% 65.3%
1x31C02 3.30.70.1520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Heterotetrameric sarcosine oxidase 0.50 38.0 3.52e-01 82.3% 75.0%
5ih0A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 35.0 3.22e-01 77.4% 58.1%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5012339 244.2.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 0.96 87.0 8.91e-01 95.2% 98.3%
5077020 244.2.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 0.92 80.0 7.85e-01 90.3% 86.2%
5027663 244.2.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 0.91 83.0 8.15e-01 95.2% 90.8%
4999513 244.2.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 0.88 67.0 7.40e-01 79.0% 98.0%
4967553 244.2.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 0.88 76.0 7.70e-01 91.9% 95.0%
3290096 244.2.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 0.84 72.0 6.74e-01 91.9% 86.7%
4999506 244.2.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 0.82 66.0 6.05e-01 85.5% 70.5%
5074846 244.2.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.82 68.0 6.92e-01 90.3% 93.3%
3587483 1093.1.1.1 ↗ a+b two layers › DUF4479 › DUF4479 › DUF4479 › DUF4479 0.81 74.0 6.38e-01 96.8% 76.7%
4966292 244.2.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.78 69.0 6.79e-01 95.2% 92.3%
4336615 1093.1.1.0 ↗ a+b two layers › DUF4479 › DUF4479 › DUF4479 0.78 65.0 5.61e-01 91.9% 66.3%
3259158 244.2.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › AIF_C 0.75 59.0 5.16e-01 83.9% 72.2%
4274357 244.2.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rbx_binding 0.75 59.0 5.64e-01 83.9% 78.6%
4033729 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.73 56.0 4.90e-01 80.6% 69.7%
5040071 244.2.1.7 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.71 57.0 5.11e-01 85.5% 62.4%
3943734 244.2.1.5 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Reductase_C 0.70 55.0 4.92e-01 83.9% 62.4%
168661 4258.1.1.1 ↗ mixed a+b and a/b › Ns1 effector domain-like › Ns1 effector domain-like › Ns1 effector domain-like › Flu_NS1 0.70 56.0 4.38e-01 87.1% 46.5%
3810543 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.69 39.0 3.26e-01 96.8% 30.9%
3786604 220.1.1.244 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31261 0.65 45.0 3.60e-01 72.6% 55.2%
3399725 220.1.1.50 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 0.64 45.0 3.64e-01 74.2% 71.3%
4984182 244.2.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.63 49.0 4.41e-01 85.5% 61.2%
3619467 220.1.1.84 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 0.63 42.0 3.47e-01 98.4% 39.1%
3172569 220.1.1.245 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29445 0.63 43.0 3.33e-01 71.0% 55.6%
4024501 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 42.0 3.61e-01 71.0% 79.0%
4941159 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.61 47.0 3.96e-01 82.3% 67.6%
4013462 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 46.0 2.96e-01 82.3% 27.2%
3547186 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 41.0 3.33e-01 71.0% 63.2%
4028169 2.1.1.27 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rpb8 0.60 42.0 3.32e-01 75.8% 65.7%
3563547 220.1.1.27 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.59 41.0 3.32e-01 72.6% 73.6%
3512614 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 41.0 3.36e-01 72.6% 73.9%
3255344 220.1.1.27 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.58 41.0 3.34e-01 74.2% 75.8%
3403399 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.58 39.0 3.25e-01 71.0% 79.1%
3939412 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 39.0 3.41e-01 72.6% 80.0%
1815425 319.3.1.1 ↗ beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.56 45.0 3.92e-01 90.3% 63.0%
3256547 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 38.0 3.34e-01 72.6% 69.0%
3493556 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.37e-01 77.4% 66.4%
5047859 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 39.0 3.85e-01 77.4% 68.6%
3969495 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 43.0 2.88e-01 85.5% 99.6%
3575745 5.1.4.90 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 0.55 40.0 2.59e-01 80.6% 15.5%
3902810 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.55 38.0 3.10e-01 74.2% 69.6%
3259128 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 39.0 3.18e-01 77.4% 68.8%
3995153 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 3.24e-01 74.2% 73.3%
3893746 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 37.0 2.99e-01 74.2% 67.9%
3289663 207.11.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.54 40.0 2.85e-01 83.9% 42.1%
3615114 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 2.96e-01 74.2% 65.0%
3907113 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.53 36.0 2.81e-01 72.6% 62.6%
3417244 220.1.1.64 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.53 37.0 3.28e-01 74.2% 77.9%
3263649 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 38.0 3.07e-01 77.4% 59.2%
4004179 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.53 37.0 2.60e-01 75.8% 29.6%
3277005 220.1.1.49 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.53 37.0 2.95e-01 75.8% 61.4%
3706884 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 37.0 3.12e-01 75.8% 71.8%
3248413 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.52 42.0 3.41e-01 96.8% 82.2%
5001380 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 33.0 3.17e-01 100.0% 52.5%
3391693 11.1.5.67 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CLSTN_C 0.51 39.0 2.95e-01 82.3% 50.7%
3180612 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.51 34.0 2.12e-01 100.0% 10.9%
3506500 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.50 28.0 3.16e-01 96.8% 74.4%
4535258 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.50 39.0 3.30e-01 85.5% 67.3%
3252283 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 35.0 2.94e-01 77.4% 71.2%