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IMGVR_UViG_2634166831_000001-2634166831-2636328338
Arc-VirIMGVR_UViG_2634166831_000001-2634166831-2636328338
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 56-192
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw4F02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.61 | 27.0 | 3.25e-01 | 82.5% | 58.7% |
| 4x83A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 29.0 | 3.56e-01 | 97.8% | 75.3% |
| 1zxqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 28.0 | 3.39e-01 | 98.5% | 72.9% |
| 2yd9A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 29.0 | 3.42e-01 | 98.5% | 73.6% |
| 3n40F03 | 2.60.40.350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 31.0 | 3.49e-01 | 97.8% | 72.0% |
| 1k3rA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 25.0 | 3.60e-01 | 91.2% | 98.3% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.53 | 26.0 | 3.14e-01 | 99.3% | 72.5% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.52 | 31.0 | 3.35e-01 | 97.8% | 67.2% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 35.0 | 3.92e-01 | 100.0% | 86.2% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 26.0 | 3.10e-01 | 97.8% | 71.1% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 25.0 | 3.39e-01 | 90.5% | 95.5% |
| 4c08A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.50 | 38.0 | 3.49e-01 | 100.0% | 60.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4985588 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.91 | 80.0 | 8.16e-01 | 100.0% | 93.2% |
| 5071024 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.81 | 65.0 | 6.87e-01 | 100.0% | 91.2% |
| 4963129 | 274.1.1.68 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF7311 | 0.78 | 61.0 | 6.37e-01 | 100.0% | 88.8% |
| 4976410 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.66 | 52.0 | 5.04e-01 | 100.0% | 74.7% |
| 4162701 | 243.1.1.76 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF25976 | 0.57 | 28.0 | 2.95e-01 | 100.0% | 50.0% |
| 5068015 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.57 | 32.0 | 4.01e-01 | 98.5% | 98.7% |
| 5043255 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 32.0 | 3.97e-01 | 94.2% | 95.0% |
| 5070441 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 29.0 | 3.79e-01 | 95.6% | 98.6% |
| 4975253 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 30.0 | 3.67e-01 | 93.4% | 88.2% |
| 5037487 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.53 | 26.0 | 3.35e-01 | 95.6% | 90.8% |
| 1269 | 10.7.1.1 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 › ASRT | 0.52 | 31.0 | 3.35e-01 | 97.8% | 67.2% |
| 4586546 | 259.1.1.2 ↗ | a+b two layers › Ribosomal protein L31e-like › Ribosomal protein L31e/gp120 outer domain › Ribosomal protein L31e/gp120 outer domain › Ribosomal_L31e | 0.52 | 33.0 | 4.03e-01 | 89.1% | 98.9% |
| 3910671 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.51 | 34.0 | 3.31e-01 | 100.0% | 59.4% |
| 4965542 | 259.1.1.2 ↗ | a+b two layers › Ribosomal protein L31e-like › Ribosomal protein L31e/gp120 outer domain › Ribosomal protein L31e/gp120 outer domain › Ribosomal_L31e | 0.50 | 32.0 | 3.81e-01 | 87.6% | 96.7% |
| 4974148 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 31.0 | 3.32e-01 | 97.8% | 70.4% |
D2
medium
residues 1-55
Domain cluster:
representative