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IMGVR_UViG_2639762563_000001-2639762563-2640012037
Arc-VirIMGVR_UViG_2639762563_000001-2639762563-2640012037
Identity
- Kingdom:
- archaea
Quality
93.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-84
Domain cluster:
rep: IMGVR_UViG_2600255154_000001-2600255154-2601102951__D3-79
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.68 | 40.0 | 4.47e-01 | 76.2% | 75.4% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.64 | 37.0 | 3.65e-01 | 75.0% | 51.1% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.64 | 44.0 | 4.00e-01 | 76.2% | 54.8% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.62 | 50.0 | 4.01e-01 | 92.5% | 45.1% |
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.62 | 55.0 | 4.22e-01 | 100.0% | 64.7% |
| 4dqaA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 40.0 | 2.93e-01 | 70.0% | 66.8% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 42.0 | 3.22e-01 | 76.2% | 36.1% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 36.0 | 4.19e-01 | 100.0% | 89.5% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.58 | 45.0 | 3.47e-01 | 85.0% | 59.6% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.57 | 42.0 | 3.58e-01 | 78.8% | 86.3% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.56 | 50.0 | 4.48e-01 | 100.0% | 91.2% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 49.0 | 4.08e-01 | 97.5% | 61.5% |
| 4yfbC01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.56 | 42.0 | 2.85e-01 | 80.0% | 98.3% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.55 | 47.0 | 4.21e-01 | 98.8% | 67.5% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.54 | 34.0 | 3.69e-01 | 96.2% | 76.1% |
| 7vt9A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 39.0 | 4.11e-01 | 92.5% | 84.9% |
| 4rzkA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.63e-01 | 80.0% | 67.8% |
| 2wc7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 37.0 | 3.79e-01 | 92.5% | 75.9% |
| 1ou8A00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.52 | 38.0 | 3.45e-01 | 97.5% | 57.5% |
| 1dwnA00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.52 | 41.0 | 3.61e-01 | 88.7% | 66.1% |
| 3rv0B03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 35.0 | 3.56e-01 | 70.0% | 78.5% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.51 | 42.0 | 3.83e-01 | 91.3% | 82.4% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 40.0 | 3.42e-01 | 86.3% | 83.0% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 41.0 | 3.63e-01 | 86.3% | 65.5% |
| 1w4vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 37.0 | 3.32e-01 | 77.5% | 81.8% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 32.0 | 3.54e-01 | 83.7% | 85.2% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4082107 | 7089.1.1.3 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD | 0.80 | 41.0 | 4.35e-01 | 72.5% | 57.1% |
| 3219318 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.71 | 42.0 | 2.77e-01 | 76.2% | 15.7% |
| 3979195 | 274.1.1.35 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 | 0.70 | 46.0 | 3.98e-01 | 77.5% | 44.0% |
| 3743052 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.69 | 48.0 | 2.98e-01 | 72.5% | 33.6% |
| 3219425 | 5.1.3.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 | 0.67 | 51.0 | 4.33e-01 | 78.8% | 72.0% |
| 5039391 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 50.0 | 3.12e-01 | 78.8% | 39.1% |
| 4033339 | 520.1.1.2 ↗ | beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › PF27308 | 0.66 | 46.0 | 4.56e-01 | 75.0% | 68.2% |
| 5017610 | 210.1.1.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 | 0.65 | 60.0 | 4.37e-01 | 100.0% | 95.6% |
| 3966051 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 48.0 | 3.97e-01 | 77.5% | 48.1% |
| 3479661 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 44.0 | 3.99e-01 | 71.2% | 55.5% |
| 3402824 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.64 | 47.0 | 2.99e-01 | 77.5% | 39.5% |
| 4672450 | 210.1.1.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 | 0.64 | 59.0 | 4.30e-01 | 100.0% | 97.1% |
| 4927832 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 41.0 | 3.66e-01 | 80.0% | 47.3% |
| 5040587 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.63 | 57.0 | 4.54e-01 | 98.8% | 61.3% |
| 3989328 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 44.0 | 4.16e-01 | 72.5% | 93.6% |
| 5022781 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 45.0 | 2.95e-01 | 76.2% | 19.7% |
| 4390303 | 5.1.3.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 | 0.61 | 47.0 | 2.79e-01 | 80.0% | 57.1% |
| 4938265 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.60 | 41.0 | 4.69e-01 | 72.5% | 93.3% |
| 3381113 | 12.1.1.36 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GHD | 0.60 | 46.0 | 4.39e-01 | 80.0% | 72.2% |
| 4046583 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.59 | 53.0 | 4.52e-01 | 100.0% | 80.8% |
| 3979245 | 520.1.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related | 0.59 | 41.0 | 4.29e-01 | 76.2% | 78.7% |
| 5049477 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 39.0 | 4.47e-01 | 95.0% | 91.7% |
| 3519579 | 295.1.1.20 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Intu_longin_3 | 0.59 | 39.0 | 3.98e-01 | 78.8% | 68.8% |
| 3941391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 35.0 | 3.88e-01 | 100.0% | 78.3% |
| 3999576 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.58 | 50.0 | 4.14e-01 | 96.2% | 82.1% |
| 4019645 | 109.2.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_92, Glyco_hydro_92N | 0.58 | 43.0 | 2.57e-01 | 81.2% | 53.6% |
| 3616618 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 40.0 | 2.68e-01 | 76.2% | 27.5% |
| 3510681 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 45.0 | 4.68e-01 | 97.5% | 90.7% |
| 4547801 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 35.0 | 3.44e-01 | 100.0% | 56.7% |
| 3302818 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.55 | 33.0 | 3.70e-01 | 100.0% | 83.6% |
| 3722300 | 511.1.1.2 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › PF27034 | 0.55 | 41.0 | 3.09e-01 | 78.8% | 73.0% |
| 5004871 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 42.0 | 4.06e-01 | 90.0% | 73.3% |
| 4947399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 46.0 | 4.40e-01 | 100.0% | 82.1% |
| 490 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.54 | 34.0 | 3.57e-01 | 96.2% | 68.9% |
| 3171576 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.54 | 45.0 | 4.58e-01 | 98.8% | 93.8% |
| 3241869 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.54 | 47.0 | 4.20e-01 | 95.0% | 69.1% |
| 5048797 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.54 | 47.0 | 4.47e-01 | 100.0% | 89.5% |
| 3175626 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.53 | 41.0 | 4.26e-01 | 96.2% | 90.7% |
| None | — | 0.53 | 38.0 | 2.52e-01 | 75.0% | 22.0% | |
| 3996256 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.53 | 39.0 | 4.18e-01 | 76.2% | 88.6% |
| 3630423 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.53 | 38.0 | 3.79e-01 | 76.2% | 72.9% |
| 334525 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.52 | 43.0 | 2.89e-01 | 100.0% | 80.8% |
| 4559371 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 33.0 | 3.64e-01 | 100.0% | 81.0% |
| 4079197 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 34.0 | 3.37e-01 | 100.0% | 61.2% |
| 3839891 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 38.0 | 3.54e-01 | 77.5% | 81.0% |
| 4950404 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.52 | 37.0 | 3.80e-01 | 92.5% | 80.0% |
| 3507003 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 3.94e-01 | 100.0% | 85.3% |
| 4282868 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.51 | 34.0 | 3.60e-01 | 100.0% | 78.6% |
| 4270910 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.51 | 34.0 | 3.61e-01 | 100.0% | 78.6% |
| 4943564 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.50 | 41.0 | 4.09e-01 | 96.2% | 89.4% |
| 4335951 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.50 | 34.0 | 3.51e-01 | 100.0% | 74.0% |