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IMGVR_UViG_2639762639_000001-2639762639-2640309822

Arc-Vir

IMGVR_UViG_2639762639_000001-2639762639-2640309822

Identity

Kingdom:
archaea

Quality

69.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 50-113
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7qs4A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.76 51.0 3.65e-01 70.3% 54.2%
2fdbN00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.72 51.0 3.85e-01 73.4% 57.4%
2fbeA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.68 56.0 3.95e-01 89.1% 79.8%
3wyfE00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 46.0 3.55e-01 73.4% 36.6%
7qs0A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.66 56.0 4.04e-01 92.2% 85.5%
2wl1A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.65 55.0 3.87e-01 92.2% 77.0%
2lm3A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.65 55.0 3.79e-01 92.2% 82.4%
3kb5A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.64 54.0 3.78e-01 92.2% 79.8%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 42.0 3.73e-01 73.4% 47.3%
2b5uA03 3.10.380.10 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain 0.63 45.0 3.97e-01 96.9% 50.0%
4wvmA04 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.62 53.0 3.69e-01 92.2% 77.3%
3dsmA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 55.0 3.49e-01 100.0% 65.7%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 50.0 3.26e-01 95.3% 34.3%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 53.0 3.38e-01 100.0% 69.0%
7qryB01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.60 54.0 4.02e-01 98.4% 74.5%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 51.0 3.35e-01 100.0% 53.5%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.59 40.0 3.79e-01 85.9% 57.5%
1dbzA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.57 51.0 3.66e-01 100.0% 58.7%
3q6kA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 48.0 3.06e-01 100.0% 68.2%
4bq2D01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.57 44.0 3.17e-01 84.4% 89.4%
1ub1A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.55 44.0 3.60e-01 89.1% 62.4%
3vxvA00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.55 34.0 3.43e-01 84.4% 61.5%
2b5nB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 3.02e-01 100.0% 48.0%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 44.0 2.83e-01 90.6% 78.8%
7ly5B01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.53 43.0 3.38e-01 93.8% 91.5%
3kh8B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 40.0 3.11e-01 84.4% 81.8%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 38.0 3.72e-01 76.6% 87.1%
1qxmA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 40.0 3.19e-01 87.5% 71.7%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.52 42.0 3.31e-01 96.9% 47.2%
2yh9B00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.52 38.0 3.81e-01 79.7% 86.8%
2hdwA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 41.0 2.93e-01 93.8% 49.1%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.43e-01 95.3% 50.7%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 34.0 2.88e-01 70.3% 38.6%
2opjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 41.0 3.79e-01 93.8% 93.0%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.90e-01 90.6% 80.3%
3nctA00 3.40.50.11880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Plasmid SOS inhibition protein 0.51 42.0 3.35e-01 93.8% 43.8%
4g56A03 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.51 38.0 2.97e-01 87.5% 97.1%
5gm0A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.41e-01 95.3% 53.8%
2f9zC00 3.30.1330.200 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.50 42.0 3.18e-01 92.2% 97.4%
2ej8B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 37.0 2.97e-01 78.1% 43.5%
2dyuA01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.50 44.0 2.87e-01 100.0% 56.8%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4283960 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.77 57.0 3.50e-01 78.1% 69.1%
3171382 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.72 52.0 4.60e-01 75.0% 56.7%
3935202 220.1.1.161 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 0.71 47.0 3.79e-01 71.9% 36.7%
3607885 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 48.0 4.17e-01 71.9% 49.5%
3601857 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 48.0 4.24e-01 71.9% 53.3%
3518300 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.69 49.0 3.73e-01 75.0% 51.4%
3930642 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 48.0 3.35e-01 73.4% 65.4%
3888097 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.68 48.0 3.10e-01 73.4% 48.2%
3737623 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.67 47.0 3.21e-01 73.4% 61.4%
3883217 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.67 55.0 3.80e-01 89.1% 73.2%
3601837 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 59.0 3.53e-01 100.0% 60.0%
3167802 220.1.1.33 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.66 44.0 3.72e-01 70.3% 44.4%
3848975 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.66 56.0 3.91e-01 92.2% 80.0%
3840641 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.66 56.0 3.88e-01 92.2% 74.4%
3913374 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.66 56.0 3.90e-01 92.2% 79.5%
3865538 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.66 56.0 3.88e-01 92.2% 76.9%
3757902 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.65 56.0 3.99e-01 92.2% 84.6%
4499807 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.65 56.0 3.96e-01 92.2% 82.8%
3919008 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.65 55.0 3.86e-01 92.2% 75.4%
3897969 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.65 55.0 3.74e-01 92.2% 65.9%
3659202 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.65 41.0 3.79e-01 82.8% 51.2%
4027491 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.65 57.0 4.79e-01 98.4% 65.5%
5069874 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 55.0 4.18e-01 93.8% 80.0%
3898617 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.64 54.0 3.85e-01 92.2% 79.5%
3734376 220.1.1.33 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.64 48.0 4.05e-01 81.2% 49.1%
3860446 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.64 54.0 3.81e-01 92.2% 75.8%
3864879 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.64 55.0 3.70e-01 92.2% 70.2%
3561808 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.64 54.0 3.80e-01 92.2% 77.9%
3843604 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.64 56.0 3.85e-01 95.3% 73.5%
3525010 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.64 54.0 3.81e-01 92.2% 76.2%
3856444 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.64 54.0 3.69e-01 92.2% 69.5%
3880254 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.63 53.0 3.82e-01 92.2% 73.9%
3910378 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.63 54.0 3.90e-01 92.2% 80.0%
3773248 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.63 54.0 3.68e-01 92.2% 72.6%
3888692 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.63 57.0 4.09e-01 100.0% 82.8%
3897114 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.63 57.0 4.13e-01 98.4% 89.1%
3449349 6043.1.1.4 a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 0.63 44.0 3.73e-01 76.6% 44.8%
3886846 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.63 56.0 3.91e-01 96.9% 77.7%
2898191 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.63 56.0 3.97e-01 96.9% 80.1%
3849240 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.63 54.0 3.84e-01 93.8% 83.9%
3899653 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.63 53.0 3.74e-01 92.2% 78.9%
3914744 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.63 52.0 3.65e-01 90.6% 78.5%
4012221 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 42.0 3.41e-01 71.9% 37.5%
3880816 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.62 55.0 3.99e-01 96.9% 84.7%
3564353 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.62 53.0 3.72e-01 92.2% 78.9%
3530753 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.62 53.0 3.62e-01 93.8% 67.4%
3846830 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.62 52.0 3.68e-01 92.2% 81.5%
3916979 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.61 55.0 3.92e-01 98.4% 83.8%
3568255 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.61 53.0 3.77e-01 95.3% 81.0%
3780515 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.61 53.0 3.82e-01 95.3% 85.7%
3596310 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 54.0 3.26e-01 96.9% 43.4%
3896135 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.61 55.0 3.85e-01 100.0% 80.0%
3627777 71.1.1.19 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.60 55.0 3.66e-01 100.0% 36.7%
3865427 10.1.1.9 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY 0.60 54.0 3.76e-01 98.4% 81.5%
4396772 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 44.0 3.38e-01 78.1% 78.7%
3896415 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.59 40.0 3.52e-01 73.4% 47.4%
3527194 10.1.1.8 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.59 53.0 3.74e-01 96.9% 75.6%
3920536 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 48.0 3.52e-01 87.5% 56.2%
4998373 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 44.0 4.84e-01 79.7% 100.0%
1879626 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.58 45.0 3.18e-01 89.1% 56.6%
4411895 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 41.0 3.43e-01 76.6% 75.7%
5033586 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 50.0 3.48e-01 98.4% 70.7%
3390821 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.56 42.0 3.96e-01 81.2% 65.0%
3485139 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 48.0 3.07e-01 100.0% 44.7%
3598567 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 43.0 2.66e-01 92.2% 71.1%
2793138 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.55 38.0 3.74e-01 87.5% 67.6%
3869553 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 38.0 3.07e-01 75.0% 40.7%
3766449 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 38.0 3.25e-01 75.0% 51.8%
3709381 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 43.0 2.67e-01 90.6% 71.8%
3898198 220.1.1.184 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.54 38.0 3.18e-01 76.6% 78.4%
1676514 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.53 45.0 2.86e-01 98.4% 41.6%
5041112 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 42.0 4.11e-01 92.2% 91.4%
3215615 11.1.1.532 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 0.51 43.0 3.65e-01 95.3% 67.3%
4952318 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 34.0 3.48e-01 71.9% 76.9%
5013238 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 36.0 3.05e-01 79.7% 54.2%