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IMGVR_UViG_2645727699_000001-2645727699-2646596609
Arc-VirIMGVR_UViG_2645727699_000001-2645727699-2646596609
Identity
- Kingdom:
- archaea
Quality
69.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-100
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 54.0 | 5.67e-01 | 81.0% | 73.2% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 56.0 | 5.83e-01 | 73.4% | 89.0% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 51.0 | 4.70e-01 | 73.4% | 54.1% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.77 | 61.0 | 4.65e-01 | 84.8% | 38.9% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.77 | 55.0 | 5.54e-01 | 78.5% | 75.6% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 52.0 | 5.69e-01 | 70.9% | 96.8% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.74 | 51.0 | 5.49e-01 | 77.2% | 85.1% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.72 | 52.0 | 5.00e-01 | 82.3% | 66.7% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.71 | 57.0 | 5.92e-01 | 87.3% | 100.0% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 52.0 | 4.51e-01 | 82.3% | 51.7% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.70 | 52.0 | 5.34e-01 | 81.0% | 81.8% |
| 1egdA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.70 | 50.0 | 4.19e-01 | 77.2% | 46.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 52.0 | 4.82e-01 | 81.0% | 64.7% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 51.0 | 5.18e-01 | 82.3% | 81.8% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.68 | 49.0 | 4.93e-01 | 77.2% | 100.0% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.68 | 47.0 | 5.00e-01 | 72.2% | 83.8% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.67 | 52.0 | 4.34e-01 | 86.1% | 51.0% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 44.0 | 3.62e-01 | 70.9% | 36.7% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.63 | 52.0 | 3.64e-01 | 92.4% | 55.0% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.63 | 48.0 | 4.63e-01 | 86.1% | 73.3% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.63 | 54.0 | 3.71e-01 | 100.0% | 38.5% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 39.0 | 3.71e-01 | 74.7% | 55.8% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 49.0 | 3.48e-01 | 96.2% | 65.0% |
| 4ke2A00 | 6.10.140.1860 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 48.0 | 3.79e-01 | 100.0% | 44.4% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 47.0 | 4.15e-01 | 100.0% | 75.6% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.55 | 42.0 | 4.17e-01 | 87.3% | 82.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3720488 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.75 | 55.0 | 4.61e-01 | 77.2% | 47.7% |
| 3611299 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.75 | 56.0 | 5.10e-01 | 89.9% | 60.0% |
| 4306568 | 4207.1.2.1 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7 | 0.71 | 52.0 | 4.59e-01 | 77.2% | 53.0% |
| 3271912 | 5033.1.1.0 ↗ | extended segments › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM | 0.71 | 52.0 | 4.90e-01 | 77.2% | 67.4% |
| 3189488 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.71 | 58.0 | 5.21e-01 | 89.9% | 70.0% |
| 3401938 | 3602.1.1.14 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › DUF733 | 0.70 | 51.0 | 5.20e-01 | 75.9% | 80.0% |
| 1877523 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.70 | 53.0 | 4.78e-01 | 86.1% | 58.0% |
| 3469701 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.68 | 51.0 | 3.68e-01 | 81.0% | 27.6% |
| 3223128 | 109.4.1.63 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAP42 | 0.68 | 51.0 | 3.68e-01 | 82.3% | 28.4% |
| 3395724 | 605.1.1.115 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF2368 | 0.67 | 54.0 | 4.71e-01 | 89.9% | 57.5% |
| 3949790 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.66 | 50.0 | 4.70e-01 | 82.3% | 84.0% |
| 3497504 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 48.0 | 3.41e-01 | 86.1% | 27.3% |
| 3968965 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.64 | 46.0 | 4.50e-01 | 78.5% | 68.9% |
| 3506234 | 5043.1.1.15 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like › Med14 | 0.59 | 52.0 | 4.75e-01 | 100.0% | 76.2% |
| 3850093 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.58 | 51.0 | 4.75e-01 | 100.0% | 80.0% |
| 3548646 | 604.6.1.52 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › Med14 | 0.56 | 49.0 | 4.60e-01 | 100.0% | 81.0% |
| 3915818 | 4207.1.1.35 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med14 | 0.56 | 48.0 | 4.55e-01 | 100.0% | 80.0% |
| 3474600 | 4207.1.2.48 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med14 | 0.54 | 46.0 | 4.31e-01 | 98.7% | 80.0% |
| 3628140 | 3826.1.1.43 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Med14 | 0.53 | 46.0 | 4.18e-01 | 100.0% | 72.7% |