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IMGVR_UViG_2651870118_000001-2651870118-2653830213
Arc-VirIMGVR_UViG_2651870118_000001-2651870118-2653830213
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-107
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13262.12 best | DUF4054 | 25.8 | 1.40e-05 | 100.0% | 88.6% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mo1A00 | 1.10.274.110 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.64 | 57.0 | 4.79e-01 | 100.0% | 73.8% |
| 5ts9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.63 | 53.0 | 4.34e-01 | 94.1% | 78.9% |
| 2id3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 53.0 | 4.51e-01 | 100.0% | 59.9% |
| 1tf5A04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.60 | 51.0 | 4.02e-01 | 95.3% | 92.9% |
| 2fp1B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.59 | 49.0 | 4.04e-01 | 94.1% | 77.4% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.57 | 46.0 | 4.04e-01 | 90.6% | 62.2% |
| 1vi0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 48.0 | 4.13e-01 | 98.8% | 57.2% |
| 1bekA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.57 | 43.0 | 3.48e-01 | 82.4% | 41.2% |
| 4pjjA04 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.56 | 47.0 | 4.13e-01 | 91.8% | 88.8% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 49.0 | 4.14e-01 | 100.0% | 61.1% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 46.0 | 4.21e-01 | 95.3% | 98.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3978753 | 3759.1.1.1 ↗ | alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antiterm | 0.68 | 51.0 | 4.47e-01 | 100.0% | 53.1% |
| 3402945 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.67 | 54.0 | 5.01e-01 | 94.1% | 67.3% |
| 4938848 | 5069.1.3.131 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF92 | 0.65 | 57.0 | 5.45e-01 | 100.0% | 93.0% |
| 5001330 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 55.0 | 4.99e-01 | 94.1% | 96.5% |
| 3960588 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.63 | 56.0 | 4.47e-01 | 100.0% | 95.4% |
| 3303885 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.62 | 56.0 | 5.11e-01 | 100.0% | 91.2% |
| 3689909 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 42.0 | 4.72e-01 | 94.1% | 96.9% |
| 4013825 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 48.0 | 5.03e-01 | 87.1% | 100.0% |
| 4254695 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.59 | 51.0 | 3.64e-01 | 96.5% | 36.2% |
| 4013752 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 44.0 | 4.31e-01 | 94.1% | 73.7% |
| 3469086 | 3755.4.1.17 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N | 0.57 | 47.0 | 3.95e-01 | 88.2% | 95.7% |
| 3728766 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.57 | 49.0 | 4.11e-01 | 96.5% | 94.7% |
| 3219825 | 5001.1.1.65 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Serpentine_r_xa | 0.56 | 46.0 | 3.21e-01 | 90.6% | 32.8% |
| 3650365 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 42.0 | 4.08e-01 | 84.7% | 100.0% |
| 3694198 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 42.0 | 3.00e-01 | 83.5% | 92.8% |
| 4191497 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.54 | 42.0 | 3.74e-01 | 96.5% | 57.7% |
| 3446919 | 611.7.1.15 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Rx_N | 0.52 | 44.0 | 3.71e-01 | 91.8% | 95.7% |
| 3238086 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.50 | 43.0 | 3.08e-01 | 95.3% | 40.0% |