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IMGVR_UViG_2651870206_000002-2651870206-2654117796
Arc-VirIMGVR_UViG_2651870206_000002-2651870206-2654117796
Identity
- Kingdom:
- archaea
Quality
87.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-118
Domain cluster:
rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07157.18 best | DNA_circ_N | 89.7 | 1.90e-25 | 75.9% | 98.9% |
D2
high
residues 139-338
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cwkA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 41.0 | 4.51e-01 | 84.5% | 63.1% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.73 | 41.0 | 5.24e-01 | 95.0% | 94.0% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.73 | 32.0 | 4.36e-01 | 100.0% | 79.4% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 41.0 | 5.15e-01 | 95.0% | 100.0% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.68 | 37.0 | 4.17e-01 | 80.5% | 67.3% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.68 | 37.0 | 4.39e-01 | 90.0% | 76.6% |
| 1yz5B00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.67 | 44.0 | 4.22e-01 | 83.5% | 57.2% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 45.0 | 4.41e-01 | 82.5% | 62.6% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.64 | 33.0 | 3.93e-01 | 78.5% | 71.4% |
| 2epkX03 | 1.20.120.670 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › N-acetyl-b-d-glucoasminidase | 0.63 | 52.0 | 5.00e-01 | 89.5% | 76.8% |
| 1i5pA02 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.62 | 56.0 | 5.32e-01 | 95.5% | 88.5% |
| 3x0uB01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.61 | 56.0 | 5.26e-01 | 98.0% | 92.2% |
| 4xvxA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.61 | 34.0 | 3.91e-01 | 95.5% | 72.8% |
| 3zheB02 | 1.20.190.60 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.60 | 40.0 | 4.24e-01 | 83.5% | 74.6% |
| 3qkyA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 39.0 | 3.64e-01 | 85.5% | 53.8% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.56 | 41.0 | 3.41e-01 | 75.0% | 62.9% |
| 8hk0B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 33.0 | 3.85e-01 | 99.0% | 81.2% |
| 1ihgA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 36.0 | 4.14e-01 | 82.0% | 89.0% |
| 3zc0D00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 46.0 | 4.82e-01 | 91.0% | 94.1% |
| 1hzfA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.55 | 40.0 | 3.45e-01 | 74.5% | 48.3% |
| 2fbnA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 38.0 | 4.25e-01 | 85.0% | 90.8% |
| 4hd1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 50.0 | 4.59e-01 | 100.0% | 90.5% |
| 4qhpA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.55 | 42.0 | 3.58e-01 | 80.0% | 76.5% |
| 2h7oA01 | 1.20.120.1330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Rac1-binding domain, N-terminal GTPase binding subdomain | 0.54 | 34.0 | 4.12e-01 | 84.5% | 100.0% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.54 | 38.0 | 4.22e-01 | 81.5% | 91.6% |
| 2rgnB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.54 | 39.0 | 3.93e-01 | 74.0% | 72.5% |
| 1txgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.53 | 29.0 | 3.31e-01 | 96.5% | 67.1% |
| 3wi3B00 | 1.20.58.2130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 40.0 | 3.98e-01 | 78.0% | 93.4% |
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 38.0 | 4.04e-01 | 86.5% | 82.9% |
| 3pwfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 31.0 | 3.80e-01 | 82.5% | 90.8% |
| 4i4cB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 3.36e-01 | 86.5% | 77.9% |
| 3zgzA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.51 | 35.0 | 3.75e-01 | 95.5% | 79.1% |
| 7y3eA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.51 | 41.0 | 3.24e-01 | 84.5% | 82.2% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3228302 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.78 | 42.0 | 5.38e-01 | 99.5% | 88.3% |
| 3573786 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.74 | 37.0 | 3.71e-01 | 90.0% | 47.5% |
| 3397378 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 40.0 | 4.25e-01 | 80.0% | 59.4% |
| 3229018 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.73 | 43.0 | 5.21e-01 | 100.0% | 86.7% |
| 3379018 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.72 | 57.0 | 4.13e-01 | 91.5% | 31.8% |
| 3837882 | 150.1.1.196 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF27018 | 0.71 | 44.0 | 5.12e-01 | 100.0% | 84.8% |
| 3607237 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 43.0 | 4.57e-01 | 83.0% | 67.2% |
| 3237801 | 109.4.1.93 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF6_C | 0.69 | 45.0 | 4.17e-01 | 79.5% | 52.0% |
| 1145722 | 601.4.1.6 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › TorS_sensor_domain | 0.68 | 44.0 | 5.13e-01 | 100.0% | 88.5% |
| 4803706 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.66 | 48.0 | 5.25e-01 | 84.5% | 89.2% |
| 3734033 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 35.0 | 3.83e-01 | 77.5% | 63.7% |
| 3742209 | 6140.1.1.0 ↗ | alpha superhelices › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin | 0.62 | 46.0 | 4.39e-01 | 76.5% | 89.4% |
| 3684033 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 43.0 | 3.94e-01 | 79.0% | 54.2% |
| 3803813 | 603.2.1.44 ↗ | alpha bundles › STAT-like › STAT › STAT › TPR_SYVN1_N | 0.61 | 46.0 | 4.24e-01 | 85.0% | 60.8% |
| 1719259 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.61 | 49.0 | 4.86e-01 | 83.0% | 84.5% |
| 4030072 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 44.0 | 4.13e-01 | 86.0% | 60.4% |
| 3697513 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.60 | 49.0 | 4.45e-01 | 99.0% | 64.9% |
| 3707119 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 4.72e-01 | 80.5% | 90.5% |
| 3201935 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 4.15e-01 | 81.5% | 61.8% |
| 4973614 | 5069.1.3.26 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF1622 | 0.59 | 32.0 | 4.20e-01 | 87.0% | 93.6% |
| 3523303 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 49.0 | 4.95e-01 | 86.5% | 96.9% |
| 3788679 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 46.0 | 3.73e-01 | 85.0% | 45.1% |
| 3650747 | 626.1.1.1 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 | 0.59 | 48.0 | 3.82e-01 | 84.5% | 73.8% |
| 3183478 | 601.4.1.51 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › PigN | 0.59 | 49.0 | 4.11e-01 | 86.5% | 73.2% |
| 3718575 | 109.4.1.447 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4K_N | 0.59 | 49.0 | 3.91e-01 | 88.5% | 68.4% |
| 3169342 | 109.4.1.381 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rrn11 | 0.58 | 48.0 | 4.68e-01 | 88.5% | 80.0% |
| 3886844 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.58 | 50.0 | 4.47e-01 | 91.5% | 84.0% |
| 3733427 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.58 | 52.0 | 4.03e-01 | 99.0% | 83.3% |
| 3923089 | 5054.1.1.61 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › ELO | 0.57 | 43.0 | 3.89e-01 | 76.0% | 92.8% |
| 4029822 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 45.0 | 3.37e-01 | 82.5% | 41.0% |
| 3838087 | 3799.1.1.0 ↗ | alpha bundles › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain | 0.57 | 49.0 | 4.78e-01 | 100.0% | 83.2% |
| 3612932 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 45.0 | 4.41e-01 | 82.5% | 85.5% |
| 4649278 | 109.4.1.1375 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_SYVN1_N | 0.57 | 50.0 | 4.56e-01 | 100.0% | 71.3% |
| None | — | 0.57 | 51.0 | 3.96e-01 | 97.5% | 69.8% | |
| 4945120 | 1075.1.1.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 | 0.56 | 43.0 | 4.01e-01 | 80.0% | 86.4% |
| 3601625 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 49.0 | 3.49e-01 | 94.0% | 41.4% |
| 3738327 | 109.4.1.536 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mei4 | 0.55 | 44.0 | 4.18e-01 | 84.5% | 85.4% |
| 3936543 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 41.0 | 3.95e-01 | 82.0% | 66.4% |
| 3734036 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.55 | 48.0 | 3.61e-01 | 94.5% | 60.8% |
| 4081790 | 5001.1.1.180 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › PigN | 0.55 | 45.0 | 4.04e-01 | 86.5% | 72.0% |
| 4539096 | 109.4.1.603 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF1_subA | 0.54 | 42.0 | 3.36e-01 | 87.5% | 39.8% |
| 4463618 | 109.4.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR | 0.53 | 43.0 | 2.97e-01 | 85.0% | 26.6% |
| 3839815 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.53 | 49.0 | 4.34e-01 | 99.0% | 86.0% |
| 4975325 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.53 | 40.0 | 3.97e-01 | 76.0% | 96.6% |
| 3602825 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.53 | 29.0 | 3.52e-01 | 84.5% | 80.0% |
| 3171862 | 109.4.1.451 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Iml2-TPR_39 | 0.53 | 40.0 | 3.57e-01 | 77.5% | 57.1% |
| 3838383 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.52 | 42.0 | 4.06e-01 | 100.0% | 73.9% |
| 3466658 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 46.0 | 3.86e-01 | 93.0% | 67.3% |
| 5026210 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 42.0 | 4.26e-01 | 99.5% | 84.0% |
| 3669053 | 109.4.1.98 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 46.0 | 4.00e-01 | 93.0% | 75.6% |
| 3934161 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 45.0 | 4.56e-01 | 100.0% | 90.7% |
| 4045574 | 5051.1.1.11 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › CstA | 0.52 | 48.0 | 3.57e-01 | 100.0% | 73.7% |
| 3874523 | 109.4.1.1400 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27614, PF30377 | 0.51 | 47.0 | 3.51e-01 | 100.0% | 48.6% |
| None | — | 0.51 | 36.0 | 3.91e-01 | 96.0% | 83.5% | |
| 5058174 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 43.0 | 4.22e-01 | 100.0% | 82.3% |
| 3593345 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 3.64e-01 | 83.0% | 65.8% |
| 4992667 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.50 | 37.0 | 3.33e-01 | 75.0% | 65.1% |
| 3296716 | 109.4.1.1264 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 | 0.50 | 45.0 | 4.06e-01 | 95.0% | 82.6% |
D3
high
residues 342-392
Domain cluster:
rep: CAKLQF020000011.1__CAH1085983.1__SAMEA5780031_02231__00031__D106-155