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IMGVR_UViG_2654588107_000001-2654588107-2656947701
Arc-VirIMGVR_UViG_2654588107_000001-2654588107-2656947701
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-138_159-170
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zppA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 71.0 | 4.63e-01 | 100.0% | 33.0% |
| 3jurA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 69.0 | 4.47e-01 | 100.0% | 39.2% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 66.0 | 4.22e-01 | 100.0% | 28.8% |
| 7b7pA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.59 | 50.0 | 3.74e-01 | 89.5% | 88.6% |
| 3thxB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 35.0 | 2.75e-01 | 100.0% | 31.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3987209 | 207.2.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix | 0.75 | 71.0 | 4.53e-01 | 100.0% | 29.3% |
| 4034497 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.74 | 71.0 | 4.77e-01 | 100.0% | 32.6% |
| 4012052 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 70.0 | 4.78e-01 | 100.0% | 37.4% |
| 4022255 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 65.0 | 4.47e-01 | 100.0% | 32.2% |
| 4522677 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.68 | 64.0 | 4.20e-01 | 100.0% | 27.7% |
| 4949579 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.68 | 65.0 | 4.08e-01 | 100.0% | 24.0% |
| 3195366 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.58 | 52.0 | 3.60e-01 | 100.0% | 53.3% |
| 5062313 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.53 | 44.0 | 3.62e-01 | 89.5% | 78.5% |
| 5069330 | 7575.1.1.4 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 | 0.52 | 43.0 | 3.45e-01 | 89.5% | 77.3% |