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IMGVR_UViG_2654588138_000001-2654588138-2657039760
Arc-VirIMGVR_UViG_2654588138_000001-2654588138-2657039760
Identity
- Kingdom:
- archaea
Quality
93.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71_185-268
Domain cluster:
rep: OQ504979.1__WLW36883.1__X__00107__D301-491
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09562.16 best | RE_LlaMI | 94.5 | 1.10e-26 | 54.9% | 32.7% |
| PF09562.16 | RE_LlaMI | 54.8 | 1.40e-14 | 39.2% | 21.1% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oaaB01 | 3.40.210.20 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › MvaI/BcnI restriction endonuclease, catalytic domain | 0.75 | 50.0 | 5.88e-01 | 100.0% | 95.4% |
| 2e11A00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.54 | 42.0 | 3.52e-01 | 83.0% | 98.5% |
D2
high
residues 75-174
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09562.16 best | RE_LlaMI | 78.4 | 8.90e-22 | 100.0% | 37.6% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 29.0 | 2.43e-01 | 71.0% | 25.3% |
| 2w02B02 | 2.30.30.1240 | Mainly Beta › Roll › SH3 type barrels. › AscD, thumb domain, four stranded beta-sheet | 0.54 | 28.0 | 3.24e-01 | 79.0% | 70.6% |
| 3n54B01 | 6.20.190.10 | Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 | 0.51 | 25.0 | 3.13e-01 | 87.0% | 77.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991580 | 3124.1.1.0 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain | 0.58 | 27.0 | 3.40e-01 | 85.0% | 78.0% |
| 3681793 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 31.0 | 3.96e-01 | 76.0% | 98.3% |