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IMGVR_UViG_2654588138_000003-2654588138-2657040488

Arc-Vir

IMGVR_UViG_2654588138_000003-2654588138-2657040488

Identity

Kingdom:
archaea

Quality

83.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-75
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.10e-01 86.4% 79.6%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.37e-01 89.4% 85.6%
4fcyB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 58.0 5.85e-01 86.4% 92.3%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.81e-01 100.0% 86.2%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.95e-01 90.9% 74.8%
4bwcA02 1.10.439.20 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Phospholipase B-like, domain 2 0.70 48.0 3.86e-01 71.2% 76.1%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.98e-01 87.9% 81.3%
2cqnA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.68 56.0 5.34e-01 90.9% 79.2%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 5.38e-01 100.0% 83.0%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 58.0 5.41e-01 100.0% 91.5%
1k78I00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 5.42e-01 92.4% 100.0%
4mspB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.65 46.0 4.50e-01 77.3% 90.7%
5tgtA02 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 57.0 4.63e-01 100.0% 71.5%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 5.34e-01 100.0% 100.0%
4dbgB01 6.10.140.1100 Special › Helix non-globular › Helix Hairpins › 0.61 35.0 4.02e-01 92.4% 78.7%
3zgkA00 1.10.10.2460 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 46.0 4.54e-01 98.5% 76.4%
1ng6A01 1.10.1510.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain 0.60 43.0 3.92e-01 77.3% 89.0%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 4.29e-01 87.9% 90.1%
1t0fA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.33e-01 98.5% 75.8%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.57 45.0 4.18e-01 86.4% 80.0%
2m3aA00 1.10.10.1900 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like 0.56 45.0 4.53e-01 93.9% 94.0%
4qhpA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.55 41.0 2.70e-01 81.8% 67.0%
1ni5A02 1.20.59.20 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › 0.55 39.0 3.61e-01 74.2% 76.7%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 41.0 3.87e-01 86.4% 96.4%
2guzA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.54 40.0 3.93e-01 81.8% 87.3%
4c2uA02 1.10.10.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 45.0 4.31e-01 100.0% 92.6%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 41.0 4.16e-01 87.9% 95.5%
3kt4A02 3.60.130.20 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain 0.53 45.0 2.99e-01 98.5% 75.0%
1xu0A00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.52 42.0 3.80e-01 100.0% 83.3%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5045315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 67.0 5.56e-01 92.4% 70.4%
4976651 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 64.0 6.28e-01 86.4% 100.0%
4205244 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.79 66.0 6.30e-01 89.4% 81.3%
3984312 101.1.1.202 alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 0.79 66.0 6.12e-01 89.4% 75.0%
3982565 101.1.1.202 alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 0.78 61.0 6.52e-01 83.3% 100.0%
4109840 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.77 63.0 5.50e-01 90.9% 81.0%
3493350 101.1.2.265 alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.77 61.0 5.35e-01 87.9% 71.0%
3224502 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.74 55.0 6.00e-01 81.8% 94.5%
5029501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 5.04e-01 98.5% 75.0%
4380725 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 60.0 5.82e-01 89.4% 78.7%
5005164 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 65.0 5.53e-01 100.0% 78.7%
2330433 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.74 65.0 4.98e-01 100.0% 49.7%
4979490 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 59.0 4.90e-01 90.9% 69.2%
4943354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.74e-01 93.9% 92.4%
4672256 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 58.0 4.86e-01 90.9% 73.0%
5071094 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.82e-01 100.0% 96.2%
3942599 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 61.0 5.71e-01 95.5% 86.3%
4945942 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 57.0 4.88e-01 92.4% 77.3%
4061942 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 57.0 4.69e-01 92.4% 67.2%
4982781 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 56.0 4.78e-01 90.9% 75.5%
3971266 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 4.54e-01 89.4% 66.4%
4392375 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 61.0 5.15e-01 100.0% 78.2%
5073929 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 60.0 5.14e-01 100.0% 76.4%
4660104 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 51.0 5.22e-01 81.8% 95.4%
5074322 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 5.56e-01 100.0% 97.5%
4962870 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 59.0 4.85e-01 100.0% 73.2%
5030306 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.67 55.0 4.92e-01 92.4% 76.8%
3254663 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 50.0 4.88e-01 87.9% 74.7%
3185106 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 5.23e-01 93.9% 89.3%
5000349 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 57.0 4.76e-01 100.0% 75.0%
4193552 101.8.1.2 alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.64 57.0 4.09e-01 100.0% 44.2%
3789626 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 55.0 5.62e-01 100.0% 98.5%
3259602 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 55.0 4.88e-01 100.0% 84.0%
3668680 101.1.1.65 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.63 52.0 4.58e-01 92.4% 94.0%
3433816 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 48.0 4.72e-01 84.8% 78.6%
3212935 101.1.1.4 alpha arrays › HTH › HTH › Three-helical HTH › PAX 0.62 47.0 4.93e-01 84.8% 96.7%
3823816 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 45.0 4.82e-01 84.8% 96.4%
3927392 198.1.1.1 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.60 47.0 4.51e-01 89.4% 77.5%
3642026 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 43.0 4.59e-01 89.4% 98.2%
3604599 182.1.3.0 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX 0.59 45.0 3.94e-01 83.3% 55.0%
3492885 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 45.0 4.34e-01 90.9% 87.5%
1551399 4982.2.1.1 alpha arrays › KaiA/RbsU domain-like › Mitochondrial 54S ribosomal protein L8 C-terminal domain › Mitochondrial 54S ribosomal protein L8 C-terminal domain › Mrpl_C 0.57 45.0 3.95e-01 86.4% 66.7%
2637 101.1.2.96 alpha arrays › HTH › HTH › winged helix domain › Tn7_Tnp_TnsA_C 0.57 49.0 4.32e-01 98.5% 75.0%
3734641 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.57 48.0 3.12e-01 97.0% 55.8%
4883304 185.1.1.1 alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl 0.56 43.0 4.18e-01 87.9% 83.8%
4957420 3290.1.1.0 alpha complex topology › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B 0.53 35.0 3.41e-01 71.2% 90.0%
3176372 3949.1.1.3 alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › SLS1_N 0.51 35.0 3.49e-01 81.8% 67.1%
3684708 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.50 44.0 2.73e-01 100.0% 29.4%
D2 high residues 84-172
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t7sA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.90 67.0 5.76e-01 76.4% 62.0%
2pmsC00 6.10.140.920 Special › Helix non-globular › Helix Hairpins › 0.90 60.0 5.56e-01 76.4% 56.0%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.89 65.0 4.29e-01 75.3% 47.9%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.87 64.0 5.32e-01 76.4% 51.0%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.85 60.0 5.88e-01 73.0% 68.0%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 57.0 5.56e-01 76.4% 63.5%
4dylA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.84 62.0 4.37e-01 76.4% 31.6%
1r0dA00 1.20.1410.10 Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain 0.84 64.0 4.85e-01 79.8% 86.0%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.84 60.0 4.51e-01 76.4% 33.0%
2dnxA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 60.0 5.20e-01 76.4% 50.8%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.82 54.0 5.52e-01 77.5% 69.0%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.82 63.0 6.46e-01 95.5% 82.6%
3qweA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.81 59.0 4.16e-01 76.4% 26.2%
4mtxD00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.81 54.0 5.25e-01 76.4% 63.2%
2q12A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.81 60.0 4.33e-01 78.7% 70.2%
3i2wA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.80 61.0 4.30e-01 79.8% 79.5%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.80 58.0 4.27e-01 76.4% 31.3%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.78 57.0 5.82e-01 76.4% 77.3%
3zgxA02 6.10.140.1720 Special › Helix non-globular › Helix Hairpins › 0.78 57.0 5.75e-01 76.4% 80.2%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.77 55.0 4.64e-01 75.3% 45.0%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.76 63.0 5.01e-01 88.8% 92.5%
3m0fB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.76 63.0 5.62e-01 88.8% 88.6%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 55.0 5.25e-01 76.4% 66.7%
4ke2A00 6.10.140.1860 Special › Helix non-globular › Helix Hairpins › 0.74 54.0 4.12e-01 75.3% 34.7%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 63.0 4.85e-01 91.0% 57.0%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.73 53.0 5.33e-01 76.4% 90.0%
4hkaA01 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 68.0 4.59e-01 98.9% 75.2%
3lnnB03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.73 52.0 5.88e-01 91.0% 98.5%
7yu4A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.72 62.0 4.46e-01 94.4% 77.0%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 48.0 5.62e-01 88.8% 100.0%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.72 49.0 5.54e-01 70.8% 94.0%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.71 49.0 4.33e-01 70.8% 78.6%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 46.0 5.23e-01 83.1% 93.5%
5mi7A03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.71 54.0 3.79e-01 79.8% 30.3%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 51.0 4.23e-01 77.5% 45.8%
3kyiA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.70 58.0 5.14e-01 89.9% 82.0%
1uddA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.70 52.0 3.94e-01 89.9% 33.0%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.70 62.0 5.41e-01 98.9% 84.2%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.68 43.0 4.46e-01 84.3% 67.1%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.68 60.0 5.52e-01 92.1% 86.4%
2itbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.68 52.0 4.02e-01 93.3% 36.9%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.68 49.0 5.43e-01 83.1% 95.8%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.67 47.0 4.41e-01 73.0% 58.6%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 58.0 5.33e-01 93.3% 78.1%
2qf9A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.67 48.0 4.06e-01 91.0% 43.6%
3pe0A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 59.0 5.52e-01 94.4% 85.8%
6xkyA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.67 58.0 4.65e-01 100.0% 74.3%
2qvaA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.66 56.0 4.98e-01 96.6% 64.3%
2ycdA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.66 58.0 5.28e-01 97.8% 92.3%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.65 55.0 5.04e-01 89.9% 93.8%
4a64A01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.64 53.0 4.68e-01 91.0% 93.2%
1kt1A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 42.0 3.54e-01 70.8% 50.6%
2np9A01 1.20.58.1300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 48.0 4.21e-01 84.3% 62.7%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.61 53.0 5.18e-01 100.0% 86.9%
3dcfA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 44.0 3.79e-01 87.6% 47.9%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 53.0 4.76e-01 95.5% 79.5%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.56 41.0 4.24e-01 98.9% 83.5%
1vi0A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 41.0 3.54e-01 78.7% 78.6%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3605253 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.94 70.0 5.08e-01 76.4% 32.4%
3294656 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.94 70.0 4.39e-01 76.4% 18.2%
4564236 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.94 69.0 5.29e-01 76.4% 37.8%
3726529 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.93 69.0 4.95e-01 76.4% 30.9%
3579748 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.93 70.0 5.43e-01 77.5% 84.1%
3560229 3291.1.1.230 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › TBCA_PH 0.92 68.0 5.69e-01 76.4% 53.6%
3449084 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.92 67.0 6.27e-01 75.3% 63.8%
5072280 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.92 68.0 4.91e-01 76.4% 66.5%
3996708 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.91 68.0 5.82e-01 76.4% 52.3%
3616967 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.91 68.0 4.68e-01 76.4% 37.3%
4030523 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.90 66.0 4.79e-01 75.3% 32.6%
3169381 874.1.1.0 a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.90 67.0 4.91e-01 76.4% 33.2%
3713201 4323.1.1.1 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.90 67.0 5.50e-01 76.4% 56.6%
5005097 3710.1.1.0 alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain 0.89 66.0 5.65e-01 76.4% 56.4%
3763261 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.89 62.0 4.48e-01 76.4% 29.1%
3889578 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.88 61.0 5.37e-01 71.9% 51.2%
3842667 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.87 61.0 4.72e-01 76.4% 36.6%
3896686 192.8.1.36 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain 0.86 61.0 5.87e-01 74.2% 65.0%
3779599 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.86 64.0 3.90e-01 76.4% 86.0%
3872955 109.4.1.2380 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_10, TPR_12, TPR_MalT 0.86 60.0 3.66e-01 71.9% 14.5%
5063777 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.86 64.0 4.52e-01 76.4% 28.9%
4516988 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.86 63.0 5.33e-01 76.4% 48.6%
3178900 192.2.1.30 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Uds1 0.86 63.0 5.25e-01 76.4% 46.9%
5063778 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.85 60.0 3.72e-01 100.0% 14.4%
3563618 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.85 62.0 5.72e-01 77.5% 60.9%
4934439 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.85 63.0 3.85e-01 76.4% 14.7%
3915878 3922.1.1.65 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PLC-beta_C 0.85 62.0 4.51e-01 75.3% 31.2%
3888162 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.85 62.0 5.48e-01 76.4% 55.8%
3709492 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.84 62.0 5.54e-01 76.4% 56.7%
4941676 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.84 59.0 4.60e-01 76.4% 36.6%
5081366 601.33.1.0 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.84 60.0 4.79e-01 74.2% 50.3%
4166693 7013.1.1.1 alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.84 66.0 5.04e-01 82.0% 66.5%
3493417 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.84 60.0 4.82e-01 76.4% 41.2%
3730449 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.82 60.0 4.27e-01 76.4% 34.4%
3526587 109.4.1.839 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Maestro_HEAT 0.82 67.0 4.38e-01 86.5% 38.9%
4273807 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.82 55.0 3.42e-01 76.4% 13.9%
3172116 3922.1.1.317 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF30351 0.82 63.0 6.16e-01 96.6% 74.7%
3596258 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 55.0 3.89e-01 74.2% 24.3%
3594129 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.81 59.0 4.35e-01 75.3% 31.6%
4960231 4323.1.1.0 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.81 60.0 4.94e-01 76.4% 46.9%
3823336 4207.1.1.0 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) 0.81 56.0 5.12e-01 74.2% 55.7%
3410365 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.80 56.0 3.58e-01 71.9% 22.1%
3633320 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.79 58.0 4.03e-01 76.4% 25.2%
3870850 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.79 62.0 4.97e-01 95.5% 45.6%
3753969 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.78 57.0 5.44e-01 76.4% 67.0%
3683804 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.77 56.0 4.88e-01 75.3% 51.5%
3903553 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.77 57.0 5.16e-01 76.4% 60.0%
3789322 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.77 60.0 4.11e-01 98.9% 25.6%
3461533 3755.3.1.610 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › UPF0114 0.77 55.0 4.93e-01 75.3% 54.4%
3224003 9001.1.1.3 alpha bundles › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMPIT 0.77 60.0 6.32e-01 95.5% 91.3%
4663047 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 53.0 3.86e-01 71.9% 49.8%
3505422 633.21.1.27 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › PF31009 0.75 52.0 4.14e-01 70.8% 50.0%
3470751 3755.3.1.297 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 0.75 67.0 5.37e-01 95.5% 52.5%
4210642 3755.1.1.12 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ 0.74 54.0 4.77e-01 76.4% 52.3%
3473984 603.1.1.97 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.74 68.0 4.80e-01 98.9% 82.0%
3607086 4992.1.1.0 extended segments › RelB-like › RelB-like › RelB-like 0.74 63.0 6.69e-01 98.9% 100.0%
3855880 622.4.1.19 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › CD20 0.73 53.0 5.03e-01 76.4% 63.8%
4335871 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.73 66.0 6.04e-01 100.0% 76.4%
4463865 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.73 50.0 3.43e-01 73.0% 21.4%
3485540 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.72 68.0 5.26e-01 98.9% 58.3%
3252617 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 53.0 3.46e-01 77.5% 26.8%
3608012 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.72 63.0 6.49e-01 96.6% 96.5%
3600361 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.72 59.0 5.82e-01 98.9% 82.1%
4169835 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.71 66.0 5.19e-01 100.0% 86.3%
3981661 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.71 58.0 5.85e-01 91.0% 87.8%
4192699 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.70 62.0 5.29e-01 92.1% 67.7%
3640724 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 56.0 3.98e-01 86.5% 50.4%
5059077 150.1.1.3 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin 0.69 58.0 4.66e-01 96.6% 48.8%
3250955 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.69 61.0 4.18e-01 94.4% 96.1%
3746549 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.69 47.0 4.22e-01 70.8% 53.6%
3927056 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.68 62.0 4.59e-01 97.8% 69.5%
3246464 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.65 53.0 3.59e-01 100.0% 22.8%
3545387 3602.1.1.0 alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain 0.65 60.0 5.57e-01 98.9% 97.3%
4052317 3890.1.1.0 alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins 0.65 52.0 3.98e-01 87.6% 78.1%
3631429 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.64 54.0 4.54e-01 95.5% 87.5%
3875112 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.63 56.0 3.75e-01 98.9% 58.5%
3762595 604.7.1.13 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › HR1 0.63 57.0 5.73e-01 100.0% 100.0%
3276221 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.60 52.0 4.56e-01 94.4% 99.2%