←Back to structures
IMGVR_UViG_2667527400_000001-2667527400-2667995894
Arc-VirIMGVR_UViG_2667527400_000001-2667527400-2667995894
Identity
- Kingdom:
- archaea
Quality
84.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-56_72-147
Domain cluster:
rep: IMGVR_UViG_3300029737_000291-3300029737-Ga0245199_1046755__D406-512
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07179.18 best | SseB | 53.4 | 4.20e-14 | 91.7% | 87.6% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 32.0 | 3.60e-01 | 70.0% | 75.8% |
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.50 | 34.0 | 2.85e-01 | 70.0% | 78.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975767 | 358.3.1.3 ↗ | a+b complex topology › SRCR-like › Putative uncharacterized protein TTHA0547 › Putative uncharacterized protein TTHA0547 › SseB | 0.84 | 76.0 | 7.76e-01 | 94.2% | 100.0% |
| 4952258 | 3397.1.1.0 ↗ | a+b complex topology › Tic22 › Tic22 › Tic22 | 0.83 | 71.0 | 7.00e-01 | 90.0% | 100.0% |
| 3291406 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.80 | 71.0 | 6.92e-01 | 94.2% | 96.2% |
| 3288314 | 358.3.1.0 ↗ | a+b complex topology › SRCR-like › Putative uncharacterized protein TTHA0547 › Putative uncharacterized protein TTHA0547 | 0.80 | 71.0 | 7.11e-01 | 93.3% | 100.0% |
| 3955743 | 358.3.1.0 ↗ | a+b complex topology › SRCR-like › Putative uncharacterized protein TTHA0547 › Putative uncharacterized protein TTHA0547 | 0.77 | 68.0 | 6.92e-01 | 99.2% | 98.3% |
| 4033189 | 358.3.1.2 ↗ | a+b complex topology › SRCR-like › Putative uncharacterized protein TTHA0547 › Putative uncharacterized protein TTHA0547 › DUF2750 | 0.71 | 58.0 | 6.03e-01 | 87.5% | 98.2% |
| 4030166 | 3397.1.1.0 ↗ | a+b complex topology › Tic22 › Tic22 › Tic22 | 0.62 | 43.0 | 4.63e-01 | 70.0% | 95.0% |
| 3939311 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 25.0 | 2.62e-01 | 75.8% | 38.2% |
| 4025655 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.56 | 23.0 | 2.63e-01 | 75.8% | 46.3% |
| 4947404 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.54 | 39.0 | 3.49e-01 | 74.2% | 77.4% |
| 4026136 | 3397.1.1.0 ↗ | a+b complex topology › Tic22 › Tic22 › Tic22 | 0.51 | 43.0 | 4.12e-01 | 91.7% | 96.4% |
D2
high
residues 156-269
Domain cluster:
rep: IMGVR_UViG_3300029737_000291-3300029737-Ga0245199_1046755__D406-512
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07179.18 best | SseB | 23.2 | 9.80e-05 | 93.0% | 84.3% |