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IMGVR_UViG_2667528052_000001-2667528052-2670592870
Arc-VirIMGVR_UViG_2667528052_000001-2667528052-2670592870
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-98
Domain cluster:
rep: IMGVR_UViG_3300002219_000010-3300002219-SCADCLC_1000083292__D4-110
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04266.21 best | ASCH | 35.5 | 1.90e-08 | 96.9% | 80.6% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.91 | 87.0 | 8.61e-01 | 100.0% | 98.0% |
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.81 | 70.0 | 5.90e-01 | 93.8% | 79.9% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.79 | 73.0 | 6.06e-01 | 100.0% | 83.4% |
| 1sgvA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.78 | 44.0 | 5.34e-01 | 94.8% | 85.7% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.78 | 72.0 | 6.30e-01 | 100.0% | 86.3% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.75 | 56.0 | 6.11e-01 | 92.8% | 94.9% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.72 | 49.0 | 5.53e-01 | 94.8% | 90.7% |
| 1xneA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.72 | 63.0 | 5.98e-01 | 93.8% | 95.6% |
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.71 | 61.0 | 5.92e-01 | 94.8% | 99.1% |
| 3m6wA03 | 2.30.130.60 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.70 | 44.0 | 5.14e-01 | 95.9% | 91.0% |
| 1i2dA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.70 | 62.0 | 4.98e-01 | 97.9% | 71.8% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.70 | 46.0 | 5.37e-01 | 95.9% | 98.5% |
| 1v47A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.68 | 61.0 | 5.45e-01 | 97.9% | 97.0% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.68 | 60.0 | 5.32e-01 | 97.9% | 93.6% |
| 2gbsA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.67 | 60.0 | 5.20e-01 | 100.0% | 64.8% |
| 1jhdA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.67 | 59.0 | 4.71e-01 | 97.9% | 70.5% |
| 4dmgA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.63 | 41.0 | 4.66e-01 | 97.9% | 90.3% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 52.0 | 4.96e-01 | 100.0% | 93.2% |
| 2as9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 46.0 | 4.66e-01 | 92.8% | 86.2% |
| 3cr8A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.57 | 50.0 | 4.45e-01 | 97.9% | 75.9% |
| 1xxaC00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 31.0 | 3.51e-01 | 89.7% | 71.2% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.52 | 44.0 | 4.45e-01 | 96.9% | 95.8% |
| 1zavA01 | 3.30.70.1730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain | 0.52 | 41.0 | 3.67e-01 | 84.5% | 85.2% |
| 2gwlA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.52 | 43.0 | 3.49e-01 | 93.8% | 89.0% |
| 4esjA01 | 3.40.210.30 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain | 0.51 | 44.0 | 3.80e-01 | 96.9% | 59.6% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.50 | 33.0 | 3.50e-01 | 83.5% | 75.6% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030320 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.91 | 88.0 | 7.94e-01 | 100.0% | 84.8% |
| 178 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.91 | 87.0 | 7.96e-01 | 100.0% | 81.7% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.89 | 84.0 | 7.12e-01 | 100.0% | 69.1% |
| 5023730 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.89 | 82.0 | 7.05e-01 | 97.9% | 72.4% |
| 5079450 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.88 | 83.0 | 7.19e-01 | 100.0% | 74.3% |
| 4995643 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.88 | 82.0 | 7.07e-01 | 100.0% | 72.4% |
| 5016521 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.88 | 82.0 | 7.25e-01 | 100.0% | 77.8% |
| 4999514 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.88 | 83.0 | 6.99e-01 | 100.0% | 87.3% |
| 2391027 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.87 | 83.0 | 6.78e-01 | 100.0% | 82.0% |
| 4929736 | 1.1.9.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 | 0.87 | 81.0 | 6.54e-01 | 100.0% | 78.3% |
| 5014837 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.87 | 81.0 | 6.51e-01 | 100.0% | 74.7% |
| 4940231 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.86 | 80.0 | 7.13e-01 | 100.0% | 77.4% |
| 4122172 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.86 | 80.0 | 7.31e-01 | 100.0% | 83.9% |
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.86 | 80.0 | 6.77e-01 | 100.0% | 69.3% |
| 4954659 | 1.1.9.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 | 0.85 | 79.0 | 6.50e-01 | 100.0% | 77.6% |
| 3220176 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 79.0 | 6.64e-01 | 100.0% | 78.7% |
| 3619452 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 79.0 | 6.52e-01 | 100.0% | 79.4% |
| 5032181 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 76.0 | 6.64e-01 | 100.0% | 78.6% |
| 4970789 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.82 | 76.0 | 6.62e-01 | 100.0% | 79.3% |
| 3934702 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 79.0 | 6.76e-01 | 100.0% | 77.9% |
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 74.0 | 6.86e-01 | 97.9% | 91.7% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 75.0 | 7.07e-01 | 100.0% | 93.9% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.81 | 75.0 | 7.06e-01 | 100.0% | 98.3% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 70.0 | 6.72e-01 | 92.8% | 97.3% |
| 5059457 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 74.0 | 6.71e-01 | 100.0% | 86.2% |
| 144031 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.81 | 70.0 | 5.90e-01 | 93.8% | 79.9% |
| 5073325 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.81 | 74.0 | 6.49e-01 | 100.0% | 80.7% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 70.0 | 6.68e-01 | 92.8% | 93.6% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 71.0 | 6.94e-01 | 94.8% | 99.0% |
| 4155252 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.80 | 71.0 | 6.89e-01 | 93.8% | 96.2% |
| 3598242 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 77.0 | 6.55e-01 | 100.0% | 80.0% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.80 | 74.0 | 6.72e-01 | 100.0% | 88.0% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.80 | 74.0 | 7.08e-01 | 100.0% | 92.7% |
| 177 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.80 | 71.0 | 6.01e-01 | 95.9% | 82.4% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.80 | 72.0 | 6.91e-01 | 97.9% | 97.3% |
| 4950776 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.80 | 73.0 | 6.41e-01 | 100.0% | 87.1% |
| 3375062 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.80 | 76.0 | 6.25e-01 | 100.0% | 78.1% |
| 4019865 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.79 | 69.0 | 5.98e-01 | 93.8% | 84.1% |
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.79 | 72.0 | 6.70e-01 | 99.0% | 89.2% |
| 3894869 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 73.0 | 6.17e-01 | 100.0% | 85.2% |
| 5081834 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 72.0 | 6.44e-01 | 100.0% | 82.2% |
| 184578 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.78 | 74.0 | 6.19e-01 | 100.0% | 76.6% |
| 5024536 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 71.0 | 6.16e-01 | 100.0% | 80.7% |
| 4957730 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.77 | 71.0 | 6.21e-01 | 100.0% | 71.4% |
| 4330204 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 48.0 | 5.68e-01 | 94.8% | 93.8% |
| 4940359 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 70.0 | 5.67e-01 | 100.0% | 70.6% |
| 5023996 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.77 | 70.0 | 6.62e-01 | 100.0% | 100.0% |
| 4139080 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.76 | 47.0 | 5.74e-01 | 97.9% | 100.0% |
| 3208149 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 69.0 | 6.24e-01 | 100.0% | 73.1% |
| 5011405 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 50.0 | 5.69e-01 | 95.9% | 91.4% |
| 4328178 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 46.0 | 5.67e-01 | 95.9% | 98.3% |
| 5016524 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.74 | 68.0 | 5.90e-01 | 100.0% | 70.3% |
| 4632972 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.74 | 50.0 | 5.84e-01 | 95.9% | 100.0% |
| 3199787 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.74 | 67.0 | 5.99e-01 | 100.0% | 74.8% |
| 3279326 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.73 | 62.0 | 6.41e-01 | 90.7% | 100.0% |
| 3944719 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.73 | 66.0 | 5.86e-01 | 100.0% | 86.3% |
| 4932847 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.73 | 63.0 | 5.76e-01 | 100.0% | 72.8% |
| 4180783 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.73 | 57.0 | 5.95e-01 | 93.8% | 90.0% |
| 4928024 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 62.0 | 5.67e-01 | 100.0% | 71.1% |
| 5009842 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 66.0 | 5.16e-01 | 100.0% | 63.0% |
| 3958547 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 43.0 | 5.11e-01 | 94.8% | 89.2% |
| 5031348 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.72 | 65.0 | 5.68e-01 | 100.0% | 71.0% |
| 4582116 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.72 | 47.0 | 5.56e-01 | 97.9% | 100.0% |
| 4087191 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.71 | 46.0 | 5.43e-01 | 97.9% | 98.5% |
| 4032627 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.70 | 61.0 | 5.40e-01 | 100.0% | 66.7% |
| 4967745 | 1.1.9.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30793 | 0.70 | 54.0 | 5.23e-01 | 100.0% | 73.6% |
| 3635966 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 55.0 | 5.19e-01 | 100.0% | 72.2% |
| 4255729 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.68 | 60.0 | 5.01e-01 | 97.9% | 80.6% |
| 4968903 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 62.0 | 5.45e-01 | 100.0% | 68.6% |
| 5022895 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 61.0 | 5.17e-01 | 100.0% | 68.8% |
| 4961858 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.67 | 62.0 | 5.28e-01 | 100.0% | 64.0% |
| 21948 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.67 | 60.0 | 5.32e-01 | 100.0% | 69.1% |
| 4031101 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 56.0 | 5.04e-01 | 100.0% | 68.5% |
| 4967879 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 56.0 | 5.65e-01 | 93.8% | 96.8% |
| 4989918 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 44.0 | 4.22e-01 | 99.0% | 80.9% |
| 3387532 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.51 | 33.0 | 3.33e-01 | 97.9% | 64.0% |
| 4943219 | 205.1.1.123 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD | 0.51 | 41.0 | 3.54e-01 | 87.6% | 79.4% |
| 3426978 | 2003.1.5.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM | 0.51 | 37.0 | 2.77e-01 | 79.4% | 61.5% |
| 4028923 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.50 | 37.0 | 2.34e-01 | 77.3% | 52.5% |