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IMGVR_UViG_2681812914_000001-2681812914-2682132043

Arc-Vir

Identity

Accession:: IMGVR_UViG_2681812914_000001-2681812914-2682132043 ↗
Kingdom:: archaea

Quality

68.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-53

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4o3vA00	3.10.450.230	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein	0.71	47.0	3.46e-01	100.0%	26.1%
5cflA02	3.40.50.12100	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein	0.69	50.0	3.60e-01	100.0%	27.2%
4q52A00	2.60.40.3910	Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein	0.64	56.0	3.88e-01	100.0%	50.9%
4kbxA01	2.40.37.30	Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 ›	0.60	48.0	3.24e-01	96.1%	71.6%
1uliB00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.60	43.0	3.07e-01	100.0%	23.2%
2be3B01	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.59	43.0	3.26e-01	100.0%	31.1%
7tm7B01	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.56	42.0	2.56e-01	90.2%	86.2%
3ub1A01	3.10.450.540	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.56	44.0	3.44e-01	100.0%	36.8%
6fgjA01	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.55	40.0	2.97e-01	100.0%	28.0%
3kspA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.55	38.0	2.95e-01	100.0%	30.2%
2ltjA00	2.20.230.10	Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb.	0.54	39.0	3.20e-01	82.4%	56.8%
3kreA02	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.54	40.0	3.05e-01	100.0%	31.4%
4gniA02	3.30.30.30	Alpha Beta › 2-Layer Sandwich › Defensin A-like ›	0.51	31.0	3.03e-01	100.0%	52.6%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3986836	375.1.1.253 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66	0.68	48.0	4.74e-01	100.0%	70.9%
3444990	11.1.1.51 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2	0.64	53.0	3.84e-01	100.0%	52.1%
4955607	3435.1.1.0 ↗	a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC	0.63	42.0	2.86e-01	88.2%	16.7%
3951229	243.1.1.77 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518	0.62	44.0	3.23e-01	100.0%	26.5%
None	—		0.59	42.0	2.71e-01	90.2%	14.8%
4341158	4099.1.1.0 ↗	a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like	0.59	49.0	3.48e-01	100.0%	30.1%
5008409	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.57	42.0	3.52e-01	100.0%	44.1%
3210904	12.6.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related	0.55	37.0	2.84e-01	94.1%	26.7%
3820507	2.1.1.18 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM	0.54	31.0	2.64e-01	100.0%	28.9%
3727125	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.51	42.0	3.31e-01	96.1%	62.6%
3290294	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.50	40.0	3.27e-01	100.0%	46.0%