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IMGVR_UViG_2681812914_000001-2681812914-2682132052
Arc-VirIMGVR_UViG_2681812914_000001-2681812914-2682132052
Identity
- Kingdom:
- archaea
Quality
76.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-127
Domain cluster:
rep: MT006237.1__QIG78230.1__BIBE0010001c01_00044__00044__D18-159
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 55.0 | 5.40e-01 | 88.5% | 86.8% |
| 2mj0A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 33.0 | 4.05e-01 | 77.0% | 97.0% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.54 | 33.0 | 3.92e-01 | 77.0% | 100.0% |
| 2y8tA03 | 2.10.70.70 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.53 | 26.0 | 3.33e-01 | 99.1% | 87.3% |
| 1wfmA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 43.0 | 4.04e-01 | 92.0% | 88.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 393101 | 4166.1.1.3 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Gp22 | 0.66 | 54.0 | 5.21e-01 | 88.5% | 82.7% |
| 2632533 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.60 | 30.0 | 3.60e-01 | 87.6% | 73.9% |
| 4024090 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.55 | 29.0 | 3.15e-01 | 88.5% | 58.9% |
| 3701868 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.55 | 28.0 | 3.12e-01 | 87.6% | 57.8% |
| 4523053 | 382.1.1.7 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type | 0.54 | 32.0 | 3.86e-01 | 77.9% | 92.9% |
| 3164479 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.54 | 38.0 | 4.08e-01 | 89.4% | 86.3% |
| 3965860 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.52 | 37.0 | 3.85e-01 | 89.4% | 84.0% |
D2
medium
residues 171-245