←Back to structures
IMGVR_UViG_2681812914_000001-2681812914-2682132060
Arc-VirIMGVR_UViG_2681812914_000001-2681812914-2682132060
Identity
- Kingdom:
- archaea
Quality
76.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-61
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1woqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 63.0 | 5.09e-01 | 100.0% | 53.6% |
| 5dynA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 59.0 | 4.94e-01 | 100.0% | 52.8% |
| 4af1A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.69 | 60.0 | 4.72e-01 | 100.0% | 57.9% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.65 | 54.0 | 4.64e-01 | 100.0% | 57.9% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.64 | 55.0 | 4.35e-01 | 96.6% | 71.1% |
| 1o9aA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.64 | 35.0 | 3.98e-01 | 84.7% | 70.5% |
| 2dtcA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 48.0 | 3.89e-01 | 100.0% | 42.2% |
| 1ki1B02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 49.0 | 3.74e-01 | 86.4% | 45.8% |
| 1h8mA00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.62 | 48.0 | 3.68e-01 | 94.9% | 35.7% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.61 | 46.0 | 3.77e-01 | 96.6% | 42.0% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.61 | 52.0 | 4.31e-01 | 100.0% | 53.8% |
| 1ukxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.61 | 53.0 | 4.11e-01 | 100.0% | 51.1% |
| 1dbhA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 50.0 | 3.88e-01 | 89.8% | 56.2% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 51.0 | 4.47e-01 | 100.0% | 62.4% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.60 | 51.0 | 3.88e-01 | 100.0% | 61.7% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.60 | 50.0 | 4.72e-01 | 96.6% | 76.0% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.59 | 50.0 | 3.89e-01 | 100.0% | 69.2% |
| 4ydzA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 49.0 | 3.91e-01 | 100.0% | 43.7% |
| 7bvaA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.57 | 48.0 | 3.32e-01 | 98.3% | 29.2% |
| 4wrnA02 | 2.60.40.3210 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-N domain | 0.57 | 50.0 | 4.15e-01 | 100.0% | 87.6% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 42.0 | 3.53e-01 | 84.7% | 76.5% |
| 6gcdA00 | 3.30.920.90 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › | 0.56 | 46.0 | 3.54e-01 | 100.0% | 54.7% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.55 | 39.0 | 3.06e-01 | 96.6% | 33.1% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 45.0 | 3.81e-01 | 100.0% | 61.1% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 37.0 | 3.21e-01 | 86.4% | 43.2% |
| 2k8qA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 45.0 | 3.55e-01 | 96.6% | 71.6% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 47.0 | 3.43e-01 | 98.3% | 36.2% |
| 4bh5A00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.54 | 40.0 | 3.17e-01 | 98.3% | 37.7% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 35.0 | 2.98e-01 | 84.7% | 37.0% |
| 3q1nA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 46.0 | 2.94e-01 | 98.3% | 35.4% |
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 44.0 | 3.80e-01 | 100.0% | 58.8% |
| 4my0C01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 43.0 | 3.20e-01 | 89.8% | 69.2% |
| 1shsA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.61e-01 | 100.0% | 58.3% |
| 1fyhB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 3.84e-01 | 100.0% | 85.6% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 40.0 | 3.29e-01 | 96.6% | 43.7% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 41.0 | 2.88e-01 | 88.1% | 84.4% |
| 1s3zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 40.0 | 2.96e-01 | 83.1% | 36.1% |
| 7k7jA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 3.54e-01 | 98.3% | 96.3% |
| 3n7zA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 40.0 | 3.07e-01 | 86.4% | 67.4% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3723129 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.74 | 53.0 | 3.52e-01 | 76.3% | 19.7% |
| 3452542 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.74 | 65.0 | 5.38e-01 | 100.0% | 64.8% |
| 3990244 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.71 | 42.0 | 3.33e-01 | 72.9% | 29.2% |
| 4995755 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 44.0 | 4.87e-01 | 76.3% | 82.2% |
| 5062621 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.71 | 60.0 | 3.48e-01 | 100.0% | 9.9% |
| 3199439 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 54.0 | 3.85e-01 | 100.0% | 26.8% |
| 3536117 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.70 | 55.0 | 4.10e-01 | 86.4% | 46.7% |
| 3599909 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.70 | 60.0 | 4.99e-01 | 100.0% | 78.2% |
| 3510368 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.67 | 53.0 | 3.76e-01 | 88.1% | 47.4% |
| 3791593 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 54.0 | 4.02e-01 | 100.0% | 35.3% |
| 4948155 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 52.0 | 4.04e-01 | 96.6% | 39.2% |
| 3424129 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 57.0 | 3.37e-01 | 98.3% | 15.8% |
| 3469191 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.65 | 55.0 | 4.21e-01 | 96.6% | 84.3% |
| 3227025 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 44.0 | 4.40e-01 | 100.0% | 70.0% |
| 3659556 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 46.0 | 5.14e-01 | 76.3% | 100.0% |
| 4203232 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.62 | 54.0 | 3.26e-01 | 98.3% | 18.4% |
| 3722420 | 2008.1.1.143 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 | 0.62 | 53.0 | 3.97e-01 | 100.0% | 38.1% |
| 3992373 | 220.1.1.10 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SSrecog | 0.62 | 50.0 | 4.37e-01 | 100.0% | 57.9% |
| 3443636 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.61 | 52.0 | 3.24e-01 | 98.3% | 17.4% |
| 4863562 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.61 | 51.0 | 4.47e-01 | 98.3% | 61.1% |
| 4986577 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.61 | 44.0 | 3.66e-01 | 100.0% | 42.7% |
| 4990210 | 283.2.1.8 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 | 0.60 | 39.0 | 3.40e-01 | 100.0% | 41.1% |
| 4964516 | 213.1.1.29 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 | 0.60 | 41.0 | 3.14e-01 | 71.2% | 41.4% |
| 3681710 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.60 | 51.0 | 4.45e-01 | 100.0% | 72.6% |
| 3880203 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 50.0 | 3.50e-01 | 93.2% | 60.0% |
| 3404947 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.60 | 48.0 | 3.08e-01 | 91.5% | 20.3% |
| 3464766 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.59 | 50.0 | 3.98e-01 | 100.0% | 45.2% |
| 3401290 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.59 | 51.0 | 4.09e-01 | 100.0% | 50.8% |
| 4926846 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 50.0 | 3.71e-01 | 100.0% | 36.5% |
| 3614586 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.59 | 46.0 | 3.82e-01 | 96.6% | 45.8% |
| 3481354 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 48.0 | 3.08e-01 | 98.3% | 23.6% |
| 3509056 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.58 | 46.0 | 3.68e-01 | 94.9% | 42.4% |
| 3722896 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 46.0 | 3.44e-01 | 100.0% | 32.9% |
| 3247700 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.57 | 42.0 | 3.29e-01 | 89.8% | 33.8% |
| 5028178 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.57 | 41.0 | 2.81e-01 | 76.3% | 59.0% |
| 5040144 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 44.0 | 3.21e-01 | 84.7% | 62.9% |
| 5057493 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 43.0 | 3.10e-01 | 83.1% | 31.5% |
| 5049220 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 43.0 | 3.16e-01 | 86.4% | 65.8% |
| 3278646 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 42.0 | 3.05e-01 | 83.1% | 33.5% |
| 4981130 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 43.0 | 3.13e-01 | 86.4% | 66.5% |
| 5025264 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.53 | 44.0 | 3.84e-01 | 100.0% | 60.6% |
| 154597 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.53 | 44.0 | 3.80e-01 | 100.0% | 58.8% |
| 3635930 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 45.0 | 3.39e-01 | 98.3% | 72.9% |
| 3860880 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 3.86e-01 | 100.0% | 94.0% |
| 3277661 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 44.0 | 3.59e-01 | 100.0% | 51.4% |
| 5064524 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 41.0 | 3.07e-01 | 86.4% | 65.8% |
| 3404871 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.52 | 43.0 | 3.64e-01 | 100.0% | 72.7% |
| 4937318 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 39.0 | 3.12e-01 | 83.1% | 41.6% |
| 223453 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 40.0 | 2.88e-01 | 86.4% | 60.8% |
| 3099000 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 40.0 | 2.87e-01 | 86.4% | 59.8% |