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IMGVR_UViG_2681812966_000001-2681812966-2682307650
Arc-VirIMGVR_UViG_2681812966_000001-2681812966-2682307650
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-134
Domain cluster:
rep: IMGVR_UViG_2799112903_000003-2799112903-2800859073__D21-100
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zovA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.70 | 53.0 | 4.20e-01 | 80.5% | 87.3% |
| 1u02A02 | 3.30.70.1020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 | 0.69 | 52.0 | 5.35e-01 | 80.5% | 90.8% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 44.0 | 4.63e-01 | 74.4% | 84.3% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.63 | 46.0 | 4.14e-01 | 79.3% | 68.3% |
| 1vkwA02 | 3.40.109.30 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › putative nitroreductase (tm1586), domain 2 | 0.62 | 46.0 | 4.40e-01 | 80.5% | 77.1% |
| 2rb7A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.61 | 54.0 | 3.82e-01 | 97.6% | 78.3% |
| 3n5mB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 44.0 | 3.48e-01 | 78.0% | 43.2% |
| 3a8uX01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 43.0 | 3.50e-01 | 79.3% | 40.0% |
| 3i5tB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 43.0 | 3.47e-01 | 78.0% | 39.0% |
| 1vgyA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.57 | 51.0 | 3.59e-01 | 100.0% | 49.4% |
| 2pb2B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 43.0 | 3.70e-01 | 84.1% | 62.7% |
| 4gicA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.56 | 44.0 | 3.19e-01 | 86.6% | 75.8% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.56 | 40.0 | 3.44e-01 | 76.8% | 56.4% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 43.0 | 3.09e-01 | 87.8% | 27.9% |
| 3tx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.54 | 49.0 | 3.50e-01 | 100.0% | 49.6% |
| 3nx3A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 43.0 | 3.65e-01 | 87.8% | 61.0% |
| 5b7gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.54 | 43.0 | 3.10e-01 | 87.8% | 63.5% |
| 5mmjd02 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.54 | 43.0 | 4.13e-01 | 89.0% | 77.3% |
| 3jz3B01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 47.0 | 3.92e-01 | 98.8% | 96.6% |
| 3mc6A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 41.0 | 3.56e-01 | 84.1% | 64.1% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 38.0 | 3.56e-01 | 80.5% | 83.6% |
| 5i92F01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 41.0 | 3.30e-01 | 87.8% | 57.4% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.95e-01 | 100.0% | 75.8% |
| 2p58C00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 37.0 | 3.42e-01 | 92.7% | 56.2% |
| 1j5uA01 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.51 | 38.0 | 3.45e-01 | 80.5% | 85.5% |
| 2wb6A00 | 3.90.1150.90 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 44.0 | 4.00e-01 | 98.8% | 71.9% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 3.78e-01 | 86.6% | 73.4% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.51 | 38.0 | 2.50e-01 | 79.3% | 70.9% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738178 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.73 | 56.0 | 5.81e-01 | 80.5% | 92.0% |
| 5008417 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.72 | 63.0 | 5.55e-01 | 100.0% | 66.4% |
| 2652201 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.71 | 54.0 | 3.80e-01 | 80.5% | 26.8% |
| 2122949 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.71 | 53.0 | 3.75e-01 | 79.3% | 27.9% |
| 5079019 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.70 | 53.0 | 3.83e-01 | 80.5% | 29.6% |
| 3947754 | 3012.1.1.1 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase | 0.70 | 53.0 | 5.48e-01 | 80.5% | 88.0% |
| 5013279 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.70 | 53.0 | 5.47e-01 | 80.5% | 96.0% |
| 5063954 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.69 | 52.0 | 3.82e-01 | 80.5% | 31.2% |
| 5006395 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.68 | 59.0 | 5.94e-01 | 100.0% | 98.8% |
| 4948745 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.68 | 51.0 | 3.57e-01 | 80.5% | 26.8% |
| 4989841 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.67 | 57.0 | 5.10e-01 | 97.6% | 96.7% |
| 5076190 | 873.1.1.21 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6144 | 0.65 | 57.0 | 4.43e-01 | 100.0% | 62.4% |
| 5023704 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.65 | 56.0 | 4.73e-01 | 98.8% | 80.0% |
| 4392601 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.64 | 44.0 | 4.58e-01 | 73.2% | 79.5% |
| 4927590 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.64 | 48.0 | 5.08e-01 | 79.3% | 92.9% |
| 5032337 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.64 | 47.0 | 4.74e-01 | 91.5% | 80.0% |
| 4993809 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.62 | 48.0 | 4.55e-01 | 84.1% | 70.0% |
| 3826470 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.62 | 52.0 | 3.43e-01 | 95.1% | 31.2% |
| 3824290 | 1.1.1.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N | 0.60 | 51.0 | 3.40e-01 | 96.3% | 31.3% |
| 4995043 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.60 | 53.0 | 3.62e-01 | 97.6% | 48.6% |
| 3348226 | 1.1.1.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C | 0.60 | 51.0 | 3.86e-01 | 96.3% | 54.6% |
| 3300937 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.59 | 50.0 | 3.26e-01 | 96.3% | 28.6% |
| 5027134 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.59 | 51.0 | 4.50e-01 | 100.0% | 100.0% |
| 3952678 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.59 | 52.0 | 5.08e-01 | 100.0% | 98.9% |
| 3603763 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.58 | 44.0 | 4.29e-01 | 91.5% | 74.4% |
| 5081432 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.58 | 50.0 | 4.04e-01 | 100.0% | 87.1% |
| 5023702 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.58 | 50.0 | 4.06e-01 | 97.6% | 62.5% |
| 4342313 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.58 | 51.0 | 4.79e-01 | 100.0% | 81.0% |
| 4669668 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.56 | 45.0 | 4.27e-01 | 90.2% | 79.0% |
| 5013026 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.56 | 45.0 | 3.62e-01 | 90.2% | 87.6% |
| 4549024 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 41.0 | 3.73e-01 | 79.3% | 64.0% |
| 4142447 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.56 | 49.0 | 4.61e-01 | 100.0% | 85.0% |
| 3931290 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 41.0 | 3.66e-01 | 79.3% | 57.6% |
| 3712990 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 29.0 | 3.15e-01 | 86.6% | 60.0% |
| 3575884 | 109.4.1.1544 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1 | 0.55 | 49.0 | 2.68e-01 | 100.0% | 7.5% |
| 3184080 | 109.4.1.1940 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1, PF28359 | 0.54 | 46.0 | 2.52e-01 | 95.1% | 20.7% |
| 3809727 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.54 | 43.0 | 3.11e-01 | 93.9% | 37.5% |
| 3274168 | 243.6.1.11 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PF31203 | 0.53 | 28.0 | 3.15e-01 | 98.8% | 63.1% |
| 3928777 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.53 | 46.0 | 4.18e-01 | 100.0% | 72.7% |
| 3937410 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.53 | 45.0 | 2.72e-01 | 100.0% | 14.7% |
| 3225058 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.53 | 46.0 | 3.10e-01 | 100.0% | 24.9% |
| 3175410 | 109.4.1.3460 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30192 | 0.53 | 40.0 | 3.05e-01 | 90.2% | 33.2% |
| 3346100 | 109.4.1.1544 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1 | 0.53 | 45.0 | 2.52e-01 | 100.0% | 8.6% |
| 3505769 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.52 | 42.0 | 2.85e-01 | 93.9% | 29.0% |
| 3728013 | 109.4.1.1940 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1, PF28359 | 0.52 | 43.0 | 2.40e-01 | 93.9% | 33.2% |
| 3414623 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.52 | 44.0 | 3.07e-01 | 100.0% | 27.1% |
| 3740080 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.52 | 45.0 | 3.17e-01 | 100.0% | 33.9% |
| 3736265 | 109.4.1.862 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ZW10_C2 | 0.52 | 45.0 | 2.71e-01 | 100.0% | 21.0% |
| 3751168 | 109.4.1.122 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 44.0 | 2.58e-01 | 96.3% | 16.1% |
| 4238501 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.52 | 44.0 | 2.81e-01 | 96.3% | 94.2% |
| 3840795 | 109.4.1.3368 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, HEAT_EZ, HEAT_GCN1 | 0.51 | 44.0 | 2.59e-01 | 100.0% | 14.0% |
| 3920157 | 109.4.1.2709 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, HEAT_GCN1 | 0.51 | 44.0 | 2.60e-01 | 100.0% | 13.7% |
| 3227786 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.51 | 42.0 | 2.49e-01 | 96.3% | 15.2% |
| 3625878 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.51 | 42.0 | 4.02e-01 | 100.0% | 79.0% |
| 3399488 | 109.4.1.1544 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1 | 0.51 | 44.0 | 2.51e-01 | 100.0% | 17.6% |
| 3192973 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 43.0 | 3.12e-01 | 98.8% | 53.1% |
| 5009923 | 2011.1.1.37 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF1177 | 0.51 | 41.0 | 2.85e-01 | 89.0% | 36.4% |
| 5026711 | 2484.7.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Uncharacterized protein PF2046 › Uncharacterized protein PF2046 › DUF4152 | 0.50 | 40.0 | 3.04e-01 | 100.0% | 33.3% |