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IMGVR_UViG_2681812966_000001-2681812966-2682307658

Arc-Vir

IMGVR_UViG_2681812966_000001-2681812966-2682307658

Identity

Kingdom:
archaea

Quality

86.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-86
PDB
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 61.0 6.77e-01 95.2% 91.0%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 66.0 6.45e-01 96.4% 73.6%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 62.0 7.00e-01 100.0% 96.9%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 68.0 7.12e-01 98.8% 92.0%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 65.0 6.51e-01 96.4% 78.8%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 59.0 6.62e-01 100.0% 95.3%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 69.0 6.28e-01 100.0% 69.5%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 56.0 6.43e-01 94.0% 98.3%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 60.0 5.92e-01 96.4% 72.7%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 61.0 6.76e-01 98.8% 100.0%
4yiiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 65.0 6.89e-01 100.0% 97.2%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 5.96e-01 100.0% 80.3%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.78e-01 96.4% 46.7%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 5.75e-01 100.0% 75.9%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 6.12e-01 96.4% 88.0%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 54.0 5.60e-01 95.2% 77.2%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.78e-01 100.0% 70.9%
3u2rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.09e-01 98.8% 51.9%
5u8kA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.26e-01 96.4% 65.4%
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.71 56.0 4.65e-01 100.0% 48.3%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.03e-01 98.8% 56.8%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.70 55.0 5.90e-01 98.8% 98.6%
2fmlB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 5.28e-01 95.2% 96.9%
2fokB01 3.90.241.10 Alpha Beta › Alpha-Beta Complex › FokI Restriction Endonuclease; Chain A, domain 1 › Foki Restriction Endonuclease, Chain A, domain 1 0.68 62.0 4.21e-01 100.0% 90.0%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.67 54.0 5.50e-01 100.0% 90.1%
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.64 44.0 3.95e-01 85.5% 50.4%
5d1rB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 54.0 3.95e-01 95.2% 48.7%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.62 46.0 4.50e-01 80.7% 84.0%
3oo3A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.61 52.0 3.46e-01 98.8% 76.8%
5wvoC02 1.10.10.2230 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 52.0 5.11e-01 95.2% 93.2%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 52.0 4.61e-01 98.8% 82.5%
2lycA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.59 51.0 4.48e-01 100.0% 77.7%
4bmhA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 40.0 3.10e-01 72.3% 72.8%
2opeA00 3.30.540.20 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › 0.58 41.0 3.69e-01 75.9% 96.7%
8amqA02 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.57 48.0 3.26e-01 98.8% 76.6%
2r0rB00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.57 41.0 4.23e-01 77.1% 82.1%
2ysrA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 48.0 4.55e-01 100.0% 93.3%
3eujB00 1.10.225.40 Mainly Alpha › Orthogonal Bundle › NK-Lysin › MukF, C-terminal domain 0.55 49.0 4.80e-01 100.0% 94.4%
1keaA01 1.10.1670.10 Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.52 40.0 3.76e-01 100.0% 67.3%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3254663 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 60.0 6.27e-01 86.7% 80.0%
5023957 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.84 66.0 6.76e-01 96.4% 85.0%
4026717 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 64.0 6.92e-01 95.2% 94.3%
None 0.83 66.0 5.63e-01 100.0% 54.3%
3393016 101.1.2.526 alpha arrays › HTH › HTH › winged helix domain › PF27602 0.83 63.0 6.65e-01 100.0% 89.3%
4946048 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 67.0 6.90e-01 98.8% 90.0%
4240387 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 66.0 6.79e-01 100.0% 88.6%
4943786 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 59.0 6.34e-01 100.0% 88.6%
3169535 101.1.2.207 alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.81 68.0 6.39e-01 100.0% 75.0%
3890162 101.1.2.526 alpha arrays › HTH › HTH › winged helix domain › PF27602 0.81 65.0 6.85e-01 100.0% 94.7%
3725745 101.1.2.94 alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.81 63.0 6.07e-01 100.0% 72.6%
3720581 101.1.2.539 alpha arrays › HTH › HTH › winged helix domain › WH_GDS1 0.81 73.0 6.92e-01 96.4% 86.3%
3224625 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.80 61.0 6.36e-01 100.0% 88.0%
3942501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 66.0 6.46e-01 96.4% 81.1%
3468223 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.80 63.0 4.05e-01 96.4% 20.0%
3504010 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.79 68.0 4.47e-01 100.0% 24.9%
4944548 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.78 63.0 4.58e-01 96.4% 32.9%
3741636 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 61.0 5.89e-01 100.0% 75.3%
3481408 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 68.0 5.08e-01 100.0% 41.5%
3286725 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 62.0 4.72e-01 96.4% 40.0%
3933409 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 60.0 6.16e-01 100.0% 90.0%
4012162 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 5.09e-01 100.0% 46.5%
3246949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 6.61e-01 100.0% 97.5%
3344117 101.1.1.65 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.74 57.0 5.02e-01 81.9% 75.0%
3925904 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.74 66.0 5.11e-01 100.0% 46.3%
4933807 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 6.44e-01 100.0% 94.1%
3347816 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.73 67.0 5.97e-01 100.0% 72.2%
3244477 101.1.2.94 alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.73 60.0 5.97e-01 100.0% 85.9%
4588402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 6.22e-01 97.6% 97.3%
4426239 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.73 58.0 4.84e-01 100.0% 49.7%
3817137 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.73 64.0 6.07e-01 100.0% 81.0%
4998663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.06e-01 96.4% 56.2%
5035810 101.21.1.1 alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N 0.73 57.0 5.21e-01 100.0% 63.6%
3206342 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.73 56.0 5.83e-01 100.0% 92.0%
5045205 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.76e-01 98.8% 81.1%
5045315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 59.0 5.32e-01 96.4% 64.3%
4964857 101.1.2.925 alpha arrays › HTH › HTH › winged helix domain › DUF7344 0.72 61.0 5.81e-01 96.4% 78.9%
3781009 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 4.03e-01 100.0% 27.3%
3938065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 57.0 5.99e-01 100.0% 97.3%
3206236 101.1.2.520 alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.70 54.0 5.16e-01 96.4% 71.6%
4158600 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.70 56.0 4.63e-01 98.8% 49.0%
3708443 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.79e-01 100.0% 85.6%
4022828 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 53.0 4.62e-01 97.6% 53.6%
5002881 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.15e-01 96.4% 69.0%
3737595 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.70 64.0 4.46e-01 100.0% 36.1%
5078328 2004.5.1.0 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain 0.70 51.0 3.94e-01 98.8% 34.2%
4965761 101.1.2.925 alpha arrays › HTH › HTH › winged helix domain › DUF7344 0.69 59.0 5.22e-01 96.4% 65.2%
3166713 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.69 61.0 5.06e-01 100.0% 59.3%
3175904 101.1.2.113 alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 0.68 52.0 4.21e-01 96.4% 43.8%
3568884 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.68 60.0 4.78e-01 98.8% 53.3%
3738639 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.87e-01 100.0% 92.9%
3233735 101.1.1.264 alpha arrays › HTH › HTH › Three-helical HTH › SPK 0.67 53.0 5.42e-01 98.8% 88.7%
4028933 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 5.55e-01 98.8% 100.0%
3795754 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 5.29e-01 100.0% 79.0%
3193027 101.1.2.359 alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.65 52.0 4.55e-01 100.0% 57.6%
3724312 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 5.17e-01 100.0% 83.5%
4021593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 4.93e-01 98.8% 74.7%
4961017 101.1.1.552 alpha arrays › HTH › HTH › Three-helical HTH › DUF5806 0.65 45.0 4.68e-01 73.5% 94.7%
3449632 101.1.1.138 alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD 0.64 58.0 5.54e-01 100.0% 98.9%
5065435 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 52.0 5.40e-01 100.0% 100.0%
3376263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 54.0 5.44e-01 100.0% 91.8%
3167163 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.63 56.0 5.41e-01 100.0% 89.5%
3194922 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.62 47.0 3.79e-01 79.5% 72.8%
3353701 101.1.1.65 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.60 54.0 5.06e-01 100.0% 87.0%
3504003 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.59 37.0 3.50e-01 86.7% 50.0%
3370898 108.1.1.101 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_7, EF-hand_8 0.58 48.0 3.37e-01 91.6% 78.6%
3996516 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.56 36.0 3.65e-01 88.0% 63.5%
4307474 2.9.1.1 beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB 0.56 48.0 3.00e-01 96.4% 65.9%
3464621 2484.1.1.131 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_21 0.55 48.0 3.28e-01 98.8% 100.0%
3444225 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.54 38.0 3.84e-01 85.5% 72.9%
3546531 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.51 33.0 3.30e-01 91.6% 60.0%
3838347 589.1.1.2 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 0.51 37.0 2.81e-01 75.9% 50.3%