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IMGVR_UViG_2681813007_000001-2681813007-2682500045
Arc-VirIMGVR_UViG_2681813007_000001-2681813007-2682500045
Identity
- Kingdom:
- archaea
Quality
79.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-57
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ip0A01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.60 | 42.0 | 2.59e-01 | 73.7% | 14.0% |
| 1uuzB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.55 | 43.0 | 3.46e-01 | 91.2% | 68.8% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 40.0 | 2.78e-01 | 89.5% | 68.8% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 37.0 | 2.48e-01 | 86.0% | 50.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3255562 | 216.1.1.7 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d1 | 0.60 | 47.0 | 3.96e-01 | 87.7% | 53.0% |
| 5051950 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.57 | 43.0 | 3.31e-01 | 87.7% | 80.6% |
| 5065280 | 205.1.1.33 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 | 0.54 | 39.0 | 3.36e-01 | 75.4% | 86.7% |
| 3875439 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 37.0 | 2.84e-01 | 71.9% | 80.0% |
| None | — | 0.53 | 37.0 | 2.22e-01 | 80.7% | 29.0% | |
| 3478310 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 36.0 | 3.05e-01 | 77.2% | 92.7% |
| 4955510 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 36.0 | 2.82e-01 | 96.5% | 30.7% |
| 3914216 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.50 | 38.0 | 2.39e-01 | 82.5% | 52.2% |