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IMGVR_UViG_2681813027_000001-2681813027-2682580701
Arc-VirIMGVR_UViG_2681813027_000001-2681813027-2682580701
Identity
- Kingdom:
- archaea
Quality
89.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-88
Domain cluster:
rep: IMGVR_UViG_3300033781_000034-3300033781-Ga0326759_00004_125332_128028__D740-834
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dp7P00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 62.0 | 6.64e-01 | 93.2% | 97.4% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 56.0 | 5.63e-01 | 95.5% | 83.3% |
| 1ka8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 63.0 | 6.05e-01 | 98.9% | 89.0% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.68 | 56.0 | 5.82e-01 | 97.7% | 96.2% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 4.75e-01 | 95.5% | 67.6% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 53.0 | 4.78e-01 | 97.7% | 64.2% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.59e-01 | 96.6% | 64.3% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 4.67e-01 | 94.3% | 72.9% |
| 3vwoA02 | 2.10.70.40 | Mainly Beta › Ribbon › Complement Module; domain 1 › peptidoglycan hydrolase | 0.62 | 30.0 | 3.75e-01 | 80.7% | 76.5% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 4.47e-01 | 97.7% | 69.5% |
| 2ch0A01 | 1.10.10.1180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain | 0.60 | 52.0 | 5.01e-01 | 96.6% | 85.7% |
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 43.0 | 4.39e-01 | 94.3% | 79.5% |
| 3gygC02 | 3.30.70.1410 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › yhjk (haloacid dehalogenase-like hydrolase protein) domain | 0.58 | 28.0 | 3.01e-01 | 87.5% | 50.0% |
| 4p55B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 4.47e-01 | 88.6% | 97.9% |
| 2zzeA04 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.56 | 40.0 | 3.94e-01 | 75.0% | 87.4% |
| 6u26A01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.54 | 38.0 | 3.86e-01 | 96.6% | 73.9% |
| 1repC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 4.22e-01 | 93.2% | 95.6% |
| 5vogA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 36.0 | 2.96e-01 | 76.1% | 96.0% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 35.0 | 3.91e-01 | 95.5% | 97.0% |
| 1r7lA00 | 3.30.2120.10 | Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like | 0.50 | 34.0 | 3.33e-01 | 71.6% | 94.2% |
| 4oo1I01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 33.0 | 3.56e-01 | 89.8% | 80.0% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3537242 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.83 | 72.0 | 6.86e-01 | 100.0% | 81.0% |
| 5029778 | 101.1.2.43 ↗ | alpha arrays › HTH › HTH › winged helix domain › Pox_D5 | 0.82 | 70.0 | 6.95e-01 | 98.9% | 88.9% |
| 5022021 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 70.0 | 6.34e-01 | 98.9% | 71.3% |
| 3498779 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.79 | 69.0 | 7.06e-01 | 100.0% | 97.6% |
| 3743842 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 70.0 | 6.67e-01 | 100.0% | 84.0% |
| 3898745 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.79 | 70.0 | 6.81e-01 | 100.0% | 88.4% |
| 3396890 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.77 | 70.0 | 7.02e-01 | 97.7% | 95.6% |
| 4022514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 69.0 | 6.42e-01 | 100.0% | 79.1% |
| 3554191 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.73 | 62.0 | 4.22e-01 | 97.7% | 26.7% |
| 4674912 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 60.0 | 5.93e-01 | 93.2% | 83.2% |
| 3797519 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 65.0 | 3.93e-01 | 98.9% | 17.1% |
| 3926827 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.70 | 62.0 | 3.76e-01 | 98.9% | 34.9% |
| 3238923 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.70 | 62.0 | 3.79e-01 | 98.9% | 20.7% |
| 4009359 | 7558.1.1.10 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C | 0.69 | 57.0 | 5.58e-01 | 96.6% | 83.2% |
| 4994660 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 59.0 | 5.52e-01 | 96.6% | 80.0% |
| 4997255 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 51.0 | 4.93e-01 | 94.3% | 72.0% |
| 5003912 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 59.0 | 4.87e-01 | 100.0% | 86.9% |
| 3549847 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.66 | 56.0 | 3.72e-01 | 98.9% | 22.1% |
| 3550851 | 101.1.2.86 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 | 0.66 | 56.0 | 5.72e-01 | 97.7% | 95.3% |
| 3840298 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.66 | 55.0 | 4.90e-01 | 97.7% | 63.8% |
| 3713489 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 59.0 | 4.53e-01 | 97.7% | 87.9% |
| 5050129 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.66 | 58.0 | 5.36e-01 | 96.6% | 83.6% |
| 5003874 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.65 | 57.0 | 5.17e-01 | 96.6% | 94.2% |
| 4955909 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.65 | 57.0 | 5.33e-01 | 96.6% | 79.1% |
| 4961270 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.65 | 57.0 | 5.36e-01 | 95.5% | 81.9% |
| 5049515 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 57.0 | 5.20e-01 | 96.6% | 78.3% |
| 5036311 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 56.0 | 5.43e-01 | 96.6% | 87.0% |
| 3413597 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.64 | 55.0 | 3.62e-01 | 92.0% | 23.5% |
| 3788427 | 101.1.2.207 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH | 0.64 | 54.0 | 5.24e-01 | 98.9% | 82.0% |
| 3730463 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 56.0 | 4.96e-01 | 100.0% | 93.1% |
| 3481547 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.64 | 55.0 | 4.68e-01 | 97.7% | 64.0% |
| 4960288 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.63 | 49.0 | 3.95e-01 | 96.6% | 42.3% |
| 5027566 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 47.0 | 4.79e-01 | 96.6% | 82.4% |
| 4947062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 47.0 | 4.65e-01 | 94.3% | 74.7% |
| 3468223 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.63 | 47.0 | 3.22e-01 | 96.6% | 20.9% |
| 5055466 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 55.0 | 5.02e-01 | 96.6% | 85.2% |
| 5005164 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.62 | 53.0 | 4.96e-01 | 95.5% | 76.9% |
| 5001098 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 47.0 | 4.75e-01 | 97.7% | 81.1% |
| 3273635 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 54.0 | 4.85e-01 | 98.9% | 76.8% |
| 3933222 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.61 | 53.0 | 4.40e-01 | 97.7% | 61.3% |
| 3412336 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 48.0 | 4.88e-01 | 96.6% | 88.2% |
| 4966558 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 44.0 | 4.52e-01 | 96.6% | 83.5% |
| 5075144 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.58 | 34.0 | 3.64e-01 | 81.8% | 68.0% |
| 3601862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 44.0 | 2.83e-01 | 94.3% | 16.3% |
| 4023297 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.57 | 44.0 | 3.15e-01 | 85.2% | 56.8% |
| 3206556 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.55 | 48.0 | 3.54e-01 | 100.0% | 54.0% |
| 3824796 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.53 | 38.0 | 4.24e-01 | 96.6% | 97.1% |
| 3602251 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.52 | 33.0 | 3.37e-01 | 70.5% | 67.1% |
| 3386674 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.51 | 32.0 | 3.47e-01 | 79.5% | 74.7% |
| 3482620 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 37.0 | 2.71e-01 | 78.4% | 74.6% |
| 4312327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 44.0 | 3.72e-01 | 97.7% | 68.2% |
| 3036035 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.50 | 42.0 | 4.03e-01 | 94.3% | 80.0% |
| 5082316 | 101.1.2.187 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rep3_C | 0.50 | 42.0 | 4.19e-01 | 95.5% | 88.4% |