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IMGVR_UViG_2681813027_000001-2681813027-2682580704

Arc-Vir

IMGVR_UViG_2681813027_000001-2681813027-2682580704

Identity

Kingdom:
archaea

Quality

73.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 107-202
PDB
Domain cluster: rep: KP238129__AIZ11368.1__X__00034__D6-117
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.72 53.0 5.50e-01 77.1% 91.0%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.71 52.0 4.57e-01 76.0% 78.4%
1ohuA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.68 48.0 4.07e-01 75.0% 50.3%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 49.0 4.06e-01 78.1% 60.7%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.64 42.0 4.65e-01 100.0% 86.7%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.63 47.0 4.70e-01 79.2% 81.2%
3mnlB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 46.0 3.79e-01 77.1% 89.0%
2a0uB01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.63 46.0 3.98e-01 79.2% 62.5%
3feyA02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 44.0 3.56e-01 74.0% 44.3%
8ex5A01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.61 44.0 3.53e-01 75.0% 93.7%
2nwbA02 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 47.0 3.62e-01 87.5% 89.0%
2y44A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.60 46.0 3.79e-01 84.4% 85.9%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.59 42.0 3.41e-01 75.0% 47.7%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.58 29.0 2.99e-01 100.0% 47.9%
2p11A02 1.10.286.50 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.57 38.0 4.28e-01 92.7% 89.2%
3e6sA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 44.0 3.78e-01 84.4% 81.8%
2pbiA02 1.10.1240.60 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.57 40.0 4.03e-01 75.0% 80.2%
1khdA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.55 38.0 3.77e-01 70.8% 73.0%
2olpA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 38.0 3.33e-01 74.0% 80.1%
3aqbB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.53 42.0 2.95e-01 86.5% 31.5%
2i71A02 1.10.3740.10 Mainly Alpha › Orthogonal Bundle › SSO1389-like fold › SSO1389-like domains 0.52 38.0 3.37e-01 78.1% 89.9%
2etdA00 1.20.1440.20 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain 0.51 37.0 3.30e-01 96.9% 51.8%
1kblA04 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.51 41.0 2.91e-01 91.7% 34.5%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4038724 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.79 55.0 4.15e-01 71.9% 36.4%
4071151 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.70 51.0 4.58e-01 76.0% 64.6%
3413742 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 48.0 4.22e-01 71.9% 66.9%
4108750 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.69 50.0 4.68e-01 76.0% 70.0%
4928534 191.1.1.63 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_N 0.69 50.0 4.06e-01 77.1% 64.3%
3720036 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 58.0 4.99e-01 95.8% 74.8%
4984330 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.67 50.0 5.12e-01 78.1% 92.2%
3341228 109.4.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 0.66 46.0 4.72e-01 72.9% 82.1%
3337098 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 46.0 4.69e-01 74.0% 97.9%
3701510 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.65 48.0 4.26e-01 79.2% 69.7%
4941415 1076.1.1.0 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related 0.65 47.0 4.11e-01 77.1% 83.3%
4946543 2004.1.3.3 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR_N 0.65 46.0 3.62e-01 72.9% 84.6%
4273749 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.63 45.0 3.39e-01 75.0% 85.5%
5026098 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.62 47.0 3.64e-01 78.1% 83.0%
5074415 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.61 44.0 3.57e-01 76.0% 86.5%
3393603 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 41.0 3.46e-01 71.9% 43.4%
3722527 101.1.2.359 ↗ alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.57 45.0 3.34e-01 84.4% 54.1%
5048320 1075.5.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.57 44.0 3.29e-01 81.2% 72.2%
None — 0.57 49.0 3.22e-01 97.9% 48.8%
3742058 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.56 48.0 3.11e-01 96.9% 49.1%
5038448 109.7.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.56 41.0 4.38e-01 82.3% 92.5%
4942450 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.56 39.0 3.26e-01 72.9% 71.4%
4056782 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.55 46.0 2.99e-01 95.8% 46.4%
4929728 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.53 49.0 3.62e-01 100.0% 87.1%
D2 high residues 353-406
PDB
D3 medium residues 19-84
PDB
D4 medium residues 214-297
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.63 31.0 3.28e-01 72.6% 50.0%
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 42.0 3.58e-01 71.4% 86.5%
1vquA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.58 40.0 4.39e-01 96.4% 89.6%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.57 43.0 3.99e-01 81.0% 77.1%
4gtnA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.57 41.0 4.36e-01 98.8% 86.5%
3h5qA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 41.0 4.38e-01 100.0% 91.4%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.55 31.0 3.60e-01 81.0% 80.7%
3alfA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 30.0 3.22e-01 86.9% 67.1%
2xmjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 29.0 3.26e-01 73.8% 73.0%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.51 35.0 3.78e-01 88.1% 85.7%
3ol0B00 6.20.90.30 Special › Other non-globular › SH3 type barrels. › 0.50 24.0 3.02e-01 71.4% 82.9%
4wh5A00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.50 39.0 3.30e-01 88.1% 96.2%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5027344 1170.1.1.0 ↗ beta barrels › IL8-related › IL8-related › IL8 0.65 32.0 3.90e-01 70.2% 70.9%
3388785 109.1.1.11 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Arc1p_N_like 0.61 42.0 3.44e-01 72.6% 72.1%
3595091 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.60 43.0 3.36e-01 76.2% 95.3%
2390779 109.1.1.11 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Arc1p_N_like 0.60 42.0 3.38e-01 73.8% 66.5%
4112414 2004.1.1.301 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 0.59 42.0 2.78e-01 73.8% 86.9%
4179803 4964.1.1.2 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.57 43.0 3.35e-01 82.1% 36.5%
3476114 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.56 38.0 2.45e-01 70.2% 40.0%
5074614 2003.1.1.22 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.56 40.0 2.72e-01 77.4% 78.3%
3166171 3355.1.1.16 ↗ alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DcuC 0.54 45.0 2.92e-01 100.0% 66.2%
4030857 3355.1.1.16 ↗ alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DcuC 0.53 38.0 2.44e-01 95.2% 14.3%
3518421 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.53 44.0 2.98e-01 96.4% 61.9%
4996608 2007.9.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 0.52 32.0 2.54e-01 88.1% 25.5%
3417161 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.52 44.0 2.59e-01 96.4% 28.7%
4848999 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 35.0 2.71e-01 71.4% 59.1%
3945997 309.1.2.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain 0.52 39.0 3.43e-01 79.8% 93.5%
3601275 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 35.0 2.27e-01 71.4% 48.7%
3581826 284.2.1.1 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 0.51 30.0 3.27e-01 92.9% 70.0%
4965077 4161.1.1.2 ↗ beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N 0.50 37.0 2.71e-01 85.7% 25.8%
D5 medium residues 304-342
PDB
Domain cluster: representative
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bs9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.75 52.0 3.28e-01 74.4% 82.9%
3f8dA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.75 58.0 4.10e-01 87.2% 98.4%
4obmA00 3.40.630.190 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein 0.74 59.0 3.62e-01 92.3% 29.1%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 56.0 4.62e-01 84.6% 50.0%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 55.0 4.44e-01 84.6% 75.9%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 54.0 4.71e-01 84.6% 58.7%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 55.0 4.87e-01 87.2% 59.3%
1vw3B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 54.0 4.15e-01 84.6% 40.9%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 54.0 4.70e-01 87.2% 59.4%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.71 56.0 3.90e-01 89.7% 97.0%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 53.0 4.62e-01 87.2% 60.0%
2rbcA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.69 54.0 3.23e-01 89.7% 39.9%
1wfqA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 51.0 4.29e-01 84.6% 52.1%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 52.0 4.53e-01 87.2% 59.4%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 54.0 3.70e-01 89.7% 33.3%
3v9fA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 53.0 3.16e-01 89.7% 18.1%
7x4qA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.68 47.0 3.20e-01 74.4% 21.2%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 4.72e-01 84.6% 90.4%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.66 50.0 3.03e-01 87.2% 16.2%
2j8gA03 2.20.120.10 Mainly Beta › Single Sheet › Multimodular pneumococcal cell wall endolysin, domain 3 › Multimodular pneumococcal cell wall endolysin, domain 3 0.66 53.0 4.72e-01 92.3% 94.8%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.66 50.0 2.91e-01 84.6% 14.0%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 52.0 3.95e-01 87.2% 37.0%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 52.0 3.01e-01 92.3% 87.5%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 48.0 3.99e-01 84.6% 43.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 49.0 4.57e-01 84.6% 90.4%
2ytyA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 48.0 3.83e-01 84.6% 43.2%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 54.0 3.81e-01 84.6% 27.9%
2wozA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.65 50.0 2.98e-01 89.7% 91.5%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 4.53e-01 84.6% 98.1%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 49.0 2.91e-01 87.2% 25.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 47.0 4.42e-01 84.6% 92.2%
3cueC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.64 45.0 3.09e-01 74.4% 22.4%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 48.0 4.62e-01 76.9% 97.8%
2jn4A00 2.40.50.240 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NifT/FixU-like 0.62 47.0 4.18e-01 92.3% 84.8%
2gtiA01 3.30.160.820 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like 0.62 45.0 4.02e-01 84.6% 89.1%
3lm2A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 49.0 3.85e-01 94.9% 57.7%
3a32A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.62 49.0 3.47e-01 97.4% 95.0%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 46.0 4.01e-01 82.1% 50.8%
2pm9A02 2.20.25.400 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 42.0 4.47e-01 74.4% 96.7%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.61 48.0 3.43e-01 89.7% 89.8%
3pijA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.61 50.0 3.50e-01 100.0% 87.9%
1qhuA01 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.61 48.0 3.17e-01 92.3% 72.7%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.61 45.0 3.64e-01 84.6% 50.0%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 46.0 3.94e-01 87.2% 82.9%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.24e-01 84.6% 96.1%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.61 44.0 4.23e-01 87.2% 100.0%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 47.0 4.55e-01 87.2% 75.6%
2yyzA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.60 43.0 3.93e-01 89.7% 55.2%
1efpA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 47.0 3.17e-01 97.4% 35.4%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 3.43e-01 84.6% 87.5%
2h1qA01 3.30.390.100 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.59 48.0 3.42e-01 94.9% 75.0%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 42.0 3.97e-01 87.2% 61.4%
6we5A00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.58 44.0 2.87e-01 89.7% 48.5%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 2.85e-01 100.0% 46.1%
1n9eA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 41.0 2.38e-01 87.2% 30.2%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.56 42.0 3.39e-01 94.9% 93.1%
5lznA00 3.10.20.360 Alpha Beta › Roll › Ubiquitin-like (UB roll) › CKK domain 0.56 45.0 3.43e-01 100.0% 93.7%
2ogjA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.56 43.0 3.21e-01 92.3% 41.7%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.56 38.0 3.61e-01 74.4% 88.2%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.56 43.0 3.27e-01 100.0% 39.0%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 40.0 3.69e-01 87.2% 100.0%
3d89A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.54 36.0 2.56e-01 71.8% 46.3%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 40.0 3.62e-01 87.2% 95.1%
3uepA00 2.30.330.10 Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like 0.53 37.0 3.06e-01 79.5% 64.7%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 37.0 2.45e-01 97.4% 24.7%
1bpeA04 3.30.210.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain 0.52 39.0 3.60e-01 87.2% 69.5%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5056707 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 58.0 5.22e-01 84.6% 58.2%
5072502 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 56.0 4.98e-01 84.6% 60.3%
4463837 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.74 51.0 3.70e-01 71.8% 28.6%
3600862 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 57.0 4.49e-01 84.6% 43.8%
3392691 391.1.2.1 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC 0.74 52.0 3.59e-01 74.4% 45.7%
5034515 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.74 54.0 3.29e-01 79.5% 52.0%
4972486 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 56.0 5.04e-01 84.6% 63.6%
4975151 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 55.0 5.00e-01 87.2% 63.6%
4029871 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.72 58.0 3.27e-01 92.3% 69.6%
4978946 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 53.0 4.72e-01 84.6% 55.0%
5005811 3414.1.1.0 ↗ beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.71 49.0 3.87e-01 71.8% 37.5%
3378005 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.71 56.0 3.35e-01 89.7% 38.3%
4003604 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 57.0 4.13e-01 89.7% 85.7%
4947996 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 54.0 4.84e-01 84.6% 60.0%
5017215 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 52.0 4.76e-01 87.2% 60.0%
4123424 2002.1.1.73 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.70 54.0 3.11e-01 87.2% 13.1%
3884389 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.69 57.0 3.82e-01 97.4% 64.9%
3537276 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.69 53.0 3.95e-01 84.6% 33.7%
None — 0.69 53.0 3.43e-01 82.1% 37.1%
4668205 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 54.0 3.46e-01 82.1% 37.1%
4564673 2002.1.1.73 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.69 53.0 3.07e-01 87.2% 13.7%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 53.0 4.81e-01 87.2% 89.1%
3620870 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.69 48.0 3.61e-01 74.4% 32.0%
3289616 2002.1.1.73 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.69 54.0 3.11e-01 89.7% 15.1%
3253321 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 52.0 4.50e-01 87.2% 73.8%
4945673 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 52.0 4.52e-01 87.2% 59.4%
5058671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 4.85e-01 89.7% 87.3%
3586203 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 54.0 4.60e-01 89.7% 90.8%
3459291 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.67 53.0 3.13e-01 89.7% 28.9%
3189736 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.67 52.0 3.06e-01 87.2% 11.0%
4942805 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.67 51.0 4.09e-01 87.2% 67.1%
4104975 2002.1.1.73 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.66 51.0 2.98e-01 89.7% 14.1%
3892822 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.66 51.0 4.15e-01 82.1% 45.3%
4944397 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 47.0 4.39e-01 76.9% 62.0%
4011464 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 51.0 3.01e-01 87.2% 11.0%
3737349 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 51.0 4.65e-01 89.7% 74.5%
4959983 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 45.0 4.07e-01 71.8% 76.4%
4011825 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.65 55.0 3.49e-01 97.4% 70.7%
3593008 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 52.0 3.04e-01 92.3% 91.0%
5047657 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 48.0 4.40e-01 82.1% 76.4%
4975150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 50.0 4.46e-01 89.7% 85.0%
3935356 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.65 46.0 3.34e-01 76.9% 41.7%
4963650 4.1.1.488 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7346 0.64 50.0 4.52e-01 87.2% 80.0%
3992780 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.64 49.0 3.01e-01 87.2% 34.0%
4950397 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 50.0 4.62e-01 92.3% 65.5%
4972824 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 49.0 4.55e-01 92.3% 69.1%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 49.0 4.46e-01 89.7% 92.7%
3931993 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 49.0 4.28e-01 87.2% 88.3%
5080835 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 46.0 4.25e-01 89.7% 65.5%
4992873 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 46.0 4.24e-01 92.3% 63.8%
4968971 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 46.0 4.22e-01 92.3% 63.6%
3979711 252.2.1.6 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_2 0.60 45.0 3.97e-01 87.2% 58.5%
4990252 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 45.0 3.72e-01 82.1% 74.3%
3711282 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 42.0 3.83e-01 82.1% 54.5%
4935682 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 45.0 4.17e-01 89.7% 67.3%
5026071 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.59 44.0 3.55e-01 79.5% 77.3%
3809551 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.59 47.0 3.06e-01 97.4% 30.2%
5002450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 44.0 4.12e-01 89.7% 67.3%
2841823 4.1.1.114 ↗ beta barrels › SH3 › SH3 › SH3 › PSA_CBD 0.59 43.0 3.99e-01 87.2% 58.9%
3265126 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.59 46.0 3.05e-01 97.4% 32.8%
3882038 223.2.1.3 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.59 43.0 2.91e-01 74.4% 20.0%
3561513 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.58 48.0 2.82e-01 100.0% 78.9%
3448051 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 44.0 2.71e-01 82.1% 24.9%
3929033 59.1.1.0 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.58 40.0 3.31e-01 76.9% 47.5%
4946578 1.1.7.140 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 0.57 46.0 3.41e-01 100.0% 68.3%
3260335 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.56 49.0 2.88e-01 100.0% 40.3%
3773287 5.1.3.202 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CNH 0.54 41.0 2.47e-01 89.7% 32.3%
3521805 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.54 38.0 3.32e-01 87.2% 44.0%
4989364 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 38.0 3.11e-01 87.2% 35.8%
4947252 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 36.0 3.60e-01 79.5% 68.9%
3506500 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.51 38.0 3.78e-01 84.6% 79.1%
3494671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.81e-01 92.3% 80.0%