Back to structures

IMGVR_UViG_2681813379_000004-2681813379-2684012959

Arc-Vir

IMGVR_UViG_2681813379_000004-2681813379-2684012959

Identity

Kingdom:
archaea

Quality

71.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-71
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14520.13 best HHH_5 36.1 9.90e-09 95.0% 87.7%
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y88A02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.91 77.0 7.79e-01 100.0% 91.5%
2i1qA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.91 79.0 7.86e-01 100.0% 90.3%
3osnA03 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.88 73.0 6.65e-01 98.3% 68.8%
6tqoA03 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.87 77.0 7.72e-01 98.3% 96.7%
3c1yA03 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.87 78.0 7.69e-01 100.0% 93.7%
2zj8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.86 74.0 7.64e-01 96.7% 98.2%
2va8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.85 73.0 7.58e-01 98.3% 100.0%
8b0qA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.84 70.0 7.05e-01 95.0% 91.7%
3k1rB00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.83 70.0 6.55e-01 100.0% 75.7%
2w9mA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.83 76.0 7.32e-01 100.0% 88.2%
1u9lB00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.82 75.0 7.09e-01 100.0% 85.7%
2a1jB01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.82 70.0 6.70e-01 96.7% 82.6%
5jrtA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.82 70.0 6.86e-01 100.0% 89.1%
2dflA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.81 68.0 6.86e-01 100.0% 93.3%
1dgsA06 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.81 73.0 6.50e-01 100.0% 75.9%
2dl0A01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.81 68.0 6.92e-01 98.3% 96.6%
2kivA02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.80 68.0 6.80e-01 95.0% 93.3%
5tt5A05 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.80 70.0 6.52e-01 100.0% 81.8%
2bgwA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.79 67.0 6.25e-01 96.7% 77.0%
1z1vA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.78 69.0 6.58e-01 100.0% 87.1%
1x9xA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.78 66.0 6.62e-01 100.0% 93.5%
6qwvH02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.78 67.0 6.86e-01 100.0% 100.0%
1mpgA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.78 68.0 5.40e-01 96.7% 66.1%
1kw4A00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.78 66.0 6.37e-01 100.0% 82.9%
4is7A01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.78 65.0 6.30e-01 100.0% 83.8%
4nj8A01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.78 64.0 6.58e-01 100.0% 98.2%
3mabA00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.77 64.0 5.73e-01 91.7% 72.9%
1pu6A02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.77 68.0 5.39e-01 100.0% 61.0%
1pk1B00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.77 66.0 6.33e-01 100.0% 84.3%
2e8oA01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.76 65.0 6.46e-01 98.3% 93.5%
4is7A02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.75 65.0 6.18e-01 100.0% 83.3%
3kkaD00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.74 65.0 6.30e-01 100.0% 89.7%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.74 65.0 6.28e-01 100.0% 88.1%
2q0zX02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.73 60.0 6.06e-01 96.7% 98.3%
3bs7A00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.72 61.0 5.73e-01 100.0% 78.7%
2ofiA00 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.72 62.0 4.44e-01 98.3% 41.0%
1kftA00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.72 57.0 5.84e-01 88.3% 96.4%
4ai4A00 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.71 59.0 4.29e-01 98.3% 40.3%
3mdqA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.68 55.0 3.92e-01 91.7% 39.2%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.76e-01 100.0% 64.6%
4unfA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.64 53.0 4.43e-01 98.3% 55.6%
2rrdA00 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.64 56.0 4.75e-01 100.0% 61.4%
2kicA00 1.10.150.590 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Dinitrogenase iron-molybdenum cofactor, N-terminal 0.63 52.0 4.63e-01 98.3% 80.2%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.63 55.0 5.06e-01 100.0% 93.7%
3qnmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 52.0 4.61e-01 100.0% 84.4%
2fq3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 51.0 4.66e-01 100.0% 87.1%
4nlbA02 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.60 51.0 4.49e-01 100.0% 73.4%
3safA02 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.59 50.0 4.34e-01 100.0% 69.0%
1bbyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.41e-01 86.7% 91.3%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.55e-01 96.7% 48.3%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 49.0 3.57e-01 100.0% 72.6%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 47.0 3.67e-01 100.0% 63.1%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.86e-01 86.7% 72.5%
2hdoA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 43.0 4.31e-01 100.0% 89.1%
2pbxA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 39.0 2.85e-01 86.7% 26.9%
7dd0C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 42.0 2.90e-01 98.3% 30.0%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4881333 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.92 83.0 7.20e-01 100.0% 65.9%
3410797 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.92 83.0 8.32e-01 100.0% 96.7%
4975697 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.91 84.0 7.90e-01 100.0% 84.3%
5052765 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.91 80.0 7.54e-01 100.0% 80.0%
3929386 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.91 81.0 7.70e-01 100.0% 82.9%
4149240 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.91 79.0 7.47e-01 100.0% 80.0%
3189901 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.91 82.0 7.78e-01 100.0% 84.3%
3554607 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.91 81.0 7.30e-01 100.0% 72.5%
5039719 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.90 78.0 7.81e-01 91.7% 91.7%
4932604 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.90 81.0 7.26e-01 98.3% 72.5%
5076923 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.90 80.0 7.54e-01 96.7% 81.4%
4946797 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.90 81.0 7.84e-01 98.3% 89.2%
5068422 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.89 82.0 7.24e-01 100.0% 71.8%
4148062 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.89 80.0 7.83e-01 98.3% 89.2%
4470895 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.89 77.0 8.01e-01 93.3% 100.0%
4981272 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.89 75.0 7.84e-01 90.0% 100.0%
4995116 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.89 76.0 7.96e-01 93.3% 100.0%
4944083 102.1.1.182 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 0.89 77.0 7.32e-01 100.0% 80.0%
4975251 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.89 78.0 7.85e-01 96.7% 95.0%
5081795 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.89 83.0 7.84e-01 100.0% 85.7%
5031290 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.89 79.0 7.47e-01 96.7% 81.4%
5059289 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.89 82.0 7.54e-01 100.0% 80.0%
4952069 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.89 77.0 7.77e-01 100.0% 93.3%
4945133 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.89 80.0 7.86e-01 98.3% 92.1%
4948001 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.89 77.0 7.52e-01 95.0% 86.2%
5039790 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.88 79.0 7.46e-01 98.3% 82.9%
4545185 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.88 79.0 7.57e-01 100.0% 85.5%
5034266 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.88 81.0 8.17e-01 98.3% 98.3%
None 0.88 78.0 7.88e-01 98.3% 96.7%
5076446 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.88 76.0 7.02e-01 100.0% 74.7%
5039717 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.88 81.0 7.66e-01 100.0% 85.7%
4987913 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.88 76.0 7.72e-01 100.0% 94.9%
None 0.88 76.0 7.37e-01 95.0% 86.2%
5051996 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.88 80.0 7.15e-01 100.0% 73.8%
4975986 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.87 76.0 7.19e-01 100.0% 80.0%
5039718 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.87 74.0 7.73e-01 93.3% 100.0%
5061085 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.87 77.0 7.78e-01 95.0% 95.0%
4979223 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.87 75.0 7.60e-01 100.0% 93.3%
3276791 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.87 77.0 7.78e-01 100.0% 96.7%
4944206 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.87 78.0 7.82e-01 98.3% 96.7%
5038523 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.87 74.0 7.22e-01 96.7% 84.6%
5059290 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.87 74.0 7.66e-01 93.3% 100.0%
4321047 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.87 79.0 5.55e-01 100.0% 35.6%
4152195 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.86 76.0 7.02e-01 96.7% 76.0%
5041504 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.86 76.0 7.23e-01 96.7% 81.4%
4927990 4156.1.1.6 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.86 74.0 4.73e-01 95.0% 21.7%
4940020 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.86 76.0 6.63e-01 100.0% 65.2%
4079060 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.86 77.0 7.33e-01 98.3% 84.1%
157085 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.86 76.0 7.46e-01 100.0% 89.1%
5060034 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.86 76.0 7.16e-01 98.3% 80.8%
4672295 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.86 80.0 6.99e-01 100.0% 70.6%
4246524 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.86 72.0 6.82e-01 96.7% 77.1%
4927478 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.86 74.0 6.99e-01 100.0% 80.0%
4234483 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.86 77.0 7.76e-01 100.0% 98.3%
3995293 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.86 79.0 7.48e-01 98.3% 94.3%
4148402 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.86 77.0 6.95e-01 100.0% 73.8%
3283042 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.86 71.0 7.17e-01 100.0% 90.0%
4964212 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.86 76.0 7.23e-01 98.3% 82.9%
4199114 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.86 76.0 7.61e-01 98.3% 96.7%
4058889 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.85 76.0 7.65e-01 100.0% 98.3%
4963018 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.85 72.0 7.52e-01 93.3% 100.0%
5000421 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.85 78.0 7.39e-01 100.0% 85.7%
5073600 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.85 77.0 7.76e-01 100.0% 98.3%
3290867 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.85 73.0 7.31e-01 93.3% 96.7%
5044794 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.85 75.0 7.36e-01 100.0% 90.8%
4041283 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.84 75.0 7.57e-01 100.0% 98.3%
3823728 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.84 72.0 6.35e-01 95.0% 65.9%
3908409 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.84 76.0 7.07e-01 100.0% 81.3%
4968089 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.84 74.0 7.48e-01 96.7% 96.7%
5081275 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.83 74.0 7.19e-01 100.0% 89.2%
4204484 102.1.1.81 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 0.83 75.0 5.28e-01 100.0% 35.4%
5045952 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.83 76.0 7.05e-01 100.0% 81.1%
4965217 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.83 71.0 6.80e-01 100.0% 81.4%
3253841 102.5.1.9 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › DUF7898 0.83 75.0 6.64e-01 100.0% 74.1%
4969952 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.83 69.0 7.16e-01 93.3% 100.0%
5065201 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.83 74.0 7.22e-01 100.0% 92.3%
3608219 102.5.1.1 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 0.83 69.0 7.20e-01 93.3% 100.0%
4949725 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.82 74.0 7.04e-01 100.0% 84.3%
4946451 102.1.1.182 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 0.82 71.0 6.76e-01 96.7% 88.6%
5060570 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.82 73.0 6.46e-01 98.3% 70.6%
4977889 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.82 73.0 6.93e-01 100.0% 84.3%
3894996 102.1.1.1 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 0.82 71.0 6.45e-01 100.0% 72.5%
3958331 102.1.1.178 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DisA-linker 0.82 71.0 5.43e-01 100.0% 42.1%
5047327 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 72.0 5.69e-01 100.0% 49.2%
5018066 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.81 72.0 7.00e-01 98.3% 89.2%
4949723 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 73.0 6.97e-01 100.0% 85.7%
4982189 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 71.0 6.79e-01 100.0% 84.3%
4286324 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.81 71.0 6.81e-01 100.0% 86.8%
4977890 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.81 68.0 6.63e-01 95.0% 86.2%
3962255 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 70.0 7.09e-01 100.0% 98.3%
3973085 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.81 71.0 7.18e-01 98.3% 98.3%
4147532 102.1.1.100 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF29713 0.81 73.0 7.13e-01 100.0% 95.4%
2330608 102.1.1.1 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 0.80 69.0 5.89e-01 100.0% 59.8%
4949718 102.1.1.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.80 67.0 6.77e-01 93.3% 93.3%
4997104 102.1.1.21 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_pol_lambd_f 0.79 71.0 5.95e-01 100.0% 60.0%
3688549 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.78 69.0 6.97e-01 100.0% 100.0%
3275598 102.1.1.16 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 0.78 69.0 6.41e-01 100.0% 81.3%
5061478 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.78 67.0 6.35e-01 95.0% 81.4%
3174667 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.77 65.0 6.59e-01 100.0% 98.3%
3184108 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.77 64.0 6.45e-01 98.3% 96.7%
D2 high residues 95-144
PDB
D3 high residues 169-287
PDB
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.64 41.0 4.53e-01 82.4% 82.8%
3g7gH00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.61 46.0 4.25e-01 79.0% 90.1%
4r1kB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 43.0 4.14e-01 73.1% 94.9%
4mp8A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.61 45.0 4.04e-01 76.5% 81.4%
5uc6A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 43.0 3.97e-01 74.8% 94.7%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 42.0 4.36e-01 75.6% 93.9%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 41.0 3.89e-01 73.1% 94.3%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.57 43.0 3.98e-01 79.0% 82.6%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.57 41.0 4.05e-01 86.6% 70.4%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.57 47.0 3.89e-01 90.8% 89.9%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 3.69e-01 77.3% 91.5%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 3.88e-01 72.3% 89.1%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 34.0 3.46e-01 81.5% 62.3%
2g18I00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.56 41.0 3.27e-01 76.5% 70.2%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 3.64e-01 77.3% 93.5%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.55 42.0 4.36e-01 80.7% 96.3%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.55 39.0 4.12e-01 80.7% 82.4%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.54 42.0 4.43e-01 82.4% 99.1%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.54 41.0 3.61e-01 81.5% 70.1%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.72e-01 77.3% 92.6%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.53 45.0 3.50e-01 91.6% 87.5%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 41.0 3.33e-01 84.0% 83.4%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 38.0 3.76e-01 77.3% 98.5%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 32.0 3.36e-01 80.7% 67.3%
7cu8E01 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.51 38.0 3.36e-01 78.2% 97.8%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 3.01e-01 95.8% 58.3%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 38.0 3.67e-01 78.2% 93.4%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.51 36.0 2.72e-01 73.1% 70.1%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 44.0 3.87e-01 97.5% 87.8%
1q4tA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 35.0 3.29e-01 70.6% 93.7%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3723834 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 43.0 5.35e-01 76.5% 98.6%
3691144 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 42.0 5.29e-01 76.5% 98.6%
3248518 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.69 49.0 4.92e-01 73.9% 80.5%
3830352 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.66 45.0 5.17e-01 81.5% 96.5%
4031510 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 43.0 4.81e-01 95.8% 91.1%
4157765 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.63 46.0 3.97e-01 75.6% 68.1%
5043598 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.63 48.0 4.60e-01 80.7% 85.7%
3889571 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.62 43.0 4.29e-01 70.6% 95.9%
4629131 9.29.1.1 beta barrels › Lipocalins/Streptavidin › VirK › VirK › VirK 0.62 48.0 4.81e-01 82.4% 95.9%
3679001 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.62 44.0 3.82e-01 73.1% 69.8%
5020511 3338.2.1.0 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.61 43.0 4.46e-01 77.3% 76.5%
5032255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 34.0 4.27e-01 76.5% 95.7%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.59 44.0 4.59e-01 99.2% 85.5%
3280641 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.59 43.0 4.57e-01 99.2% 90.0%
5012509 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 44.0 4.42e-01 78.2% 89.2%
4956351 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 46.0 3.09e-01 85.7% 37.3%
3365468 844.1.1.5 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF3527 0.58 42.0 3.30e-01 74.8% 79.1%
3542604 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.56 43.0 4.17e-01 80.7% 97.0%
3933957 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.56 40.0 3.68e-01 74.8% 75.6%
2326869 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.56 41.0 3.47e-01 78.2% 64.8%
858 9.3.1.1 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Qn_am_d_aII 0.55 42.0 4.22e-01 80.7% 88.2%
3651121 331.3.1.31 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1990 0.54 40.0 3.33e-01 77.3% 62.9%
3914794 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 38.0 3.21e-01 73.1% 86.8%
3788193 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 38.0 3.48e-01 73.1% 60.6%
3731692 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 44.0 4.28e-01 89.9% 93.1%
5040587 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.53 41.0 3.77e-01 82.4% 81.9%
3924619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 39.0 3.97e-01 97.5% 78.3%
5047706 210.1.2.4 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT 0.52 44.0 3.34e-01 90.8% 86.7%
852 9.1.1.29 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BFA1_C 0.51 38.0 3.67e-01 78.2% 93.4%
4463771 3347.1.1.0 beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 0.50 37.0 3.87e-01 76.5% 87.6%