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IMGVR_UViG_2681813379_000004-2681813379-2684012965

Arc-Vir

IMGVR_UViG_2681813379_000004-2681813379-2684012965

Identity

Kingdom:
archaea

Quality

75.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 117-180
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18780.7 best HNH_repeat 46.8 4.20e-12 82.8% 96.3%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dgzA01 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.58 41.0 3.75e-01 90.6% 55.1%
1anxA04 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.53 38.0 3.69e-01 81.2% 69.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4987601 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.56 47.0 3.87e-01 98.4% 64.5%
3589591 601.32.1.1 alpha bundles › Four-helical up-and-down bundle › FusB family N-terminal domain › FusB family N-terminal domain › EF-G-binding_N 0.53 44.0 4.19e-01 100.0% 77.5%
5053723 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.52 31.0 3.22e-01 98.4% 61.7%
D2 medium residues 35-111
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 44.6 1.20e-11 61.0% 97.8%