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IMGVR_UViG_2681813386_000003-2681813386-2684027525
Arc-VirIMGVR_UViG_2681813386_000003-2681813386-2684027525
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-140
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23984.2 best | DUF7307 | 55.7 | 7.50e-15 | 100.0% | 55.7% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lulA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.55 | 35.0 | 3.19e-01 | 77.1% | 47.3% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.55 | 40.0 | 4.09e-01 | 86.7% | 82.1% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.55 | 37.0 | 3.99e-01 | 88.0% | 85.5% |
| 1txoB00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.54 | 38.0 | 2.81e-01 | 74.7% | 70.8% |
| 4jrfA03 | 1.10.20.150 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.53 | 42.0 | 3.95e-01 | 88.0% | 95.3% |
| 1xgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 4.16e-01 | 91.6% | 89.6% |
| 3dzaA02 | 6.10.250.2140 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 33.0 | 3.69e-01 | 94.0% | 85.5% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.51 | 43.0 | 4.18e-01 | 95.2% | 92.6% |
| 2dbbA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.51 | 41.0 | 4.06e-01 | 94.0% | 90.3% |
| 4pxdA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.65e-01 | 89.2% | 98.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3592921 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 38.0 | 2.59e-01 | 71.1% | 67.0% |
| 3442291 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.54 | 43.0 | 2.78e-01 | 89.2% | 34.1% |
| 3782068 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.53 | 37.0 | 2.87e-01 | 74.7% | 71.0% |
| 3924669 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 42.0 | 4.06e-01 | 90.4% | 100.0% |
| 4929491 | 304.5.1.13 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 | 0.51 | 44.0 | 4.08e-01 | 98.8% | 98.2% |
| 3287540 | 304.56.1.5 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › PaaX_M | 0.51 | 41.0 | 4.24e-01 | 97.6% | 97.5% |
| None | — | 0.50 | 45.0 | 2.70e-01 | 98.8% | 23.0% | |
| 5017351 | 298.2.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like › FmdE | 0.50 | 35.0 | 2.82e-01 | 100.0% | 36.4% |
| 1179504 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.50 | 36.0 | 3.04e-01 | 74.7% | 50.0% |