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IMGVR_UViG_2681813386_000003-2681813386-2684027527

Arc-Vir

IMGVR_UViG_2681813386_000003-2681813386-2684027527

Identity

Kingdom:
archaea

Quality

83.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 164-261
PDB
Domain cluster: rep: IMGVR_UViG_3300014911_000429-3300014911-Ga0180301_100042856__D65-145
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 34.0 4.11e-01 76.5% 74.2%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 33.0 3.94e-01 81.6% 72.7%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 26.0 3.55e-01 78.6% 84.4%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.56 39.0 3.28e-01 74.5% 90.6%
6jb7A01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.55 40.0 3.51e-01 77.6% 79.0%
3j7yD01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 26.0 2.55e-01 79.6% 38.7%
3rc2A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 42.0 3.43e-01 85.7% 72.1%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.84e-01 86.7% 79.6%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 39.0 3.71e-01 77.6% 71.6%
2ablA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 37.0 3.78e-01 75.5% 91.8%
7ahfA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 38.0 3.40e-01 78.6% 82.2%
1zuoB00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 36.0 3.28e-01 73.5% 87.1%
1tluA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.51 36.0 3.41e-01 77.6% 59.8%
3f2kB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 44.0 3.69e-01 100.0% 66.7%
3hxlA02 2.60.40.4290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 37.0 3.87e-01 89.8% 84.4%
1xa6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 35.0 3.47e-01 71.4% 87.5%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3288507 268.1.1.4 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › Alkyl_sulf_C 0.74 36.0 3.19e-01 78.6% 34.1%
3430385 4099.1.1.1 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD 0.63 45.0 4.17e-01 74.5% 80.0%
3930705 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.62 40.0 4.05e-01 76.5% 65.0%
4931303 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.60 36.0 3.90e-01 85.7% 69.4%
3905631 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.59 39.0 3.75e-01 74.5% 60.0%
3592742 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 39.0 4.09e-01 72.4% 96.7%
4973193 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.55 34.0 3.62e-01 85.7% 70.6%
5075212 802.1.1.1 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.55 34.0 3.52e-01 86.7% 65.6%
3544618 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.55 38.0 4.04e-01 71.4% 97.6%
3597564 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 34.0 3.60e-01 81.6% 68.9%
3499597 377.1.2.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger 0.54 36.0 3.83e-01 90.8% 77.6%
4985600 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.53 35.0 3.87e-01 80.6% 82.5%
4939206 304.156.1.3 ↗ a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › DUF5402 0.53 36.0 3.41e-01 91.8% 55.2%
3494554 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 40.0 4.14e-01 87.8% 85.3%
5042099 331.10.2.1 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc 0.52 37.0 3.48e-01 77.6% 59.2%
3312483 216.1.1.1 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.52 37.0 3.52e-01 74.5% 99.2%
4029951 220.1.1.310 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29397, PF29398 0.51 35.0 3.06e-01 85.7% 46.9%
3709649 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.51 38.0 3.52e-01 79.6% 67.7%
3466459 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.51 38.0 3.39e-01 82.7% 55.0%
4828520 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.51 38.0 3.78e-01 83.7% 74.0%
5077089 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 33.0 3.83e-01 80.6% 91.4%
3738473 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.51 37.0 3.46e-01 75.5% 70.0%
3841343 2484.1.1.239 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27046, PF27073 0.50 43.0 2.77e-01 96.9% 36.4%
3780866 2484.1.1.204 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.50 43.0 2.77e-01 96.9% 36.4%
D2 high residues 268-378
PDB
Domain cluster: rep: MZ447863.1__QXN68050.1__X__00014__D586-694
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 5.20e-01 100.0% 74.3%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 5.19e-01 100.0% 77.7%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 5.10e-01 100.0% 75.5%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 5.09e-01 100.0% 84.8%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 4.89e-01 100.0% 73.0%
1dp7P00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 45.0 5.28e-01 98.2% 100.0%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 40.0 4.68e-01 91.0% 85.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 5.01e-01 100.0% 81.9%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.85e-01 100.0% 87.9%
2raqA01 3.30.70.1340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain 0.62 31.0 3.52e-01 86.5% 61.2%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.51e-01 100.0% 73.3%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.60 43.0 4.82e-01 100.0% 97.6%
3l4gC01 3.30.1370.240 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 40.0 4.16e-01 100.0% 77.1%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 37.0 4.13e-01 96.4% 90.2%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 4.47e-01 95.5% 96.7%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 37.0 3.79e-01 100.0% 73.9%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5077022 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 51.0 5.36e-01 100.0% 80.0%
5000704 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 49.0 5.43e-01 100.0% 85.6%
5030817 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.72 46.0 4.37e-01 96.4% 55.4%
4971686 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 50.0 5.18e-01 100.0% 76.2%
5077121 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 50.0 5.38e-01 100.0% 85.3%
4997255 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 48.0 5.07e-01 100.0% 79.0%
3587554 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 48.0 5.07e-01 100.0% 79.0%
4961853 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.69 42.0 5.07e-01 92.8% 92.0%
4944051 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 4.21e-01 100.0% 48.2%
4631918 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 42.0 5.02e-01 92.8% 92.0%
5027566 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 46.0 5.17e-01 100.0% 91.8%
4947062 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 47.0 5.02e-01 100.0% 85.3%
5025840 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 5.08e-01 100.0% 85.0%
5000349 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 49.0 4.80e-01 100.0% 71.7%
4971711 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 50.0 4.80e-01 100.0% 70.4%
5036311 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 49.0 5.13e-01 100.0% 86.0%
3688358 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.66 44.0 5.05e-01 91.9% 95.0%
5055466 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 53.0 5.32e-01 100.0% 84.3%
4593646 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 45.0 4.87e-01 100.0% 87.8%
4971999 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 4.69e-01 100.0% 70.4%
4982781 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 47.0 4.72e-01 100.0% 80.0%
5082509 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.62 43.0 4.14e-01 98.2% 61.5%
4988082 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 39.0 4.60e-01 99.1% 100.0%
5001098 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 4.69e-01 100.0% 91.1%
5027690 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.60 43.0 4.36e-01 100.0% 76.4%
3739985 101.1.2.98 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1 0.59 45.0 4.08e-01 100.0% 58.7%
3933222 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.58 49.0 4.37e-01 100.0% 65.2%
5003912 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 51.0 4.55e-01 100.0% 70.0%
4553370 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.57 41.0 4.10e-01 100.0% 73.9%
4966558 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 4.35e-01 100.0% 94.1%
None — 0.56 39.0 2.73e-01 100.0% 21.6%
3602910 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.56 39.0 4.27e-01 98.2% 91.1%
3602142 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.55 41.0 4.18e-01 99.1% 81.9%
4045503 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.54 28.0 3.33e-01 86.5% 72.0%
4223968 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.54 29.0 3.39e-01 81.1% 72.5%
4994470 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.54 31.0 3.69e-01 71.2% 84.0%
4969785 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 40.0 3.31e-01 82.0% 82.8%
5066425 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.53 29.0 3.32e-01 80.2% 72.5%
4193755 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.53 27.0 3.18e-01 87.4% 69.3%
4014683 101.1.2.24 ↗ alpha arrays › HTH › HTH › winged helix domain › MAGE 0.53 42.0 4.03e-01 100.0% 74.6%
5032062 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.52 40.0 3.48e-01 82.9% 81.1%
3413597 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.50 45.0 3.20e-01 100.0% 47.0%
4508433 314.1.1.3 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.50 41.0 3.00e-01 94.6% 63.9%
D3 medium residues 51-129
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1oj6A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.70 58.0 4.72e-01 89.9% 97.3%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.69 57.0 4.72e-01 91.1% 97.1%
1binA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.68 57.0 4.70e-01 92.4% 98.6%
1tu9A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.68 56.0 4.76e-01 91.1% 96.9%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.66 56.0 4.63e-01 93.7% 97.9%
3ubcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.65 53.0 4.57e-01 92.4% 100.0%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.65 49.0 5.01e-01 82.3% 96.0%
1cqxA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.64 53.0 4.35e-01 92.4% 89.3%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 52.0 5.22e-01 88.6% 87.7%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 44.0 4.56e-01 86.1% 76.0%
1gcvB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.64 52.0 4.44e-01 92.4% 97.8%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.63 50.0 5.09e-01 88.6% 87.2%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.81e-01 82.3% 89.0%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.61 51.0 4.27e-01 94.9% 100.0%
4g12A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 42.0 3.42e-01 72.2% 54.4%
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.59 45.0 4.03e-01 91.1% 56.3%
3umgA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 45.0 4.70e-01 83.5% 100.0%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.58 45.0 4.55e-01 86.1% 84.0%
3umcD02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 44.0 4.43e-01 83.5% 92.3%
1f5oA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 48.0 4.01e-01 96.2% 99.3%
3k3uA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 45.0 3.87e-01 88.6% 97.8%
6rxaA01 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.57 42.0 4.11e-01 88.6% 72.4%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 45.0 4.00e-01 88.6% 72.8%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 36.0 3.97e-01 81.0% 88.5%
6qv3A05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.84e-01 81.0% 88.2%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 4.07e-01 87.3% 82.1%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.52 43.0 3.95e-01 96.2% 92.7%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 4.06e-01 89.9% 91.4%
1zq9A02 1.10.8.480 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.52 36.0 3.45e-01 74.7% 71.4%
3di2A00 1.20.1250.50 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 42.0 3.80e-01 94.9% 97.4%
3qowA01 1.10.260.60 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.51 35.0 3.08e-01 72.2% 63.9%
3ajfA00 1.20.1440.190 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein 0.51 41.0 3.97e-01 94.9% 88.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3719996 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 52.0 4.75e-01 89.9% 61.9%
4329065 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.68 54.0 5.31e-01 87.3% 87.1%
3298 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.64 54.0 4.51e-01 97.5% 100.0%
3601936 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.63 53.0 4.43e-01 93.7% 97.1%
5071408 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.63 51.0 3.35e-01 89.9% 20.0%
3455585 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.63 49.0 4.53e-01 84.8% 66.0%
None — 0.61 53.0 3.27e-01 100.0% 88.6%
4241236 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.60 47.0 4.69e-01 84.8% 85.0%
2766590 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.59 46.0 4.33e-01 86.1% 80.6%
4167076 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.59 47.0 3.23e-01 88.6% 35.9%
3741476 101.1.2.527 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_RGF3 0.59 44.0 4.15e-01 82.3% 78.0%
4433075 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.58 47.0 4.50e-01 88.6% 76.7%
4594071 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.58 45.0 4.44e-01 84.8% 88.2%
4618102 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.58 46.0 4.61e-01 84.8% 86.3%
5021020 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.57 36.0 3.47e-01 73.4% 53.3%
4633929 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.57 46.0 4.49e-01 89.9% 95.6%
3506491 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.57 45.0 4.24e-01 89.9% 87.0%
4011174 5041.1.1.0 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.55 41.0 3.82e-01 91.1% 61.9%
3688768 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.53 38.0 3.35e-01 77.2% 85.8%
4178644 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.53 40.0 3.87e-01 86.1% 74.4%
2774789 2003.1.2.186 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Thi4, PF26311 0.52 41.0 2.65e-01 87.3% 21.7%
4962469 101.1.2.925 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7344 0.52 38.0 3.10e-01 79.7% 44.4%
4237550 2004.1.1.348 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SbcC_Walker_B 0.50 35.0 2.77e-01 77.2% 32.8%