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IMGVR_UViG_2681813386_000004-2681813386-2684027430
Arc-VirIMGVR_UViG_2681813386_000004-2681813386-2684027430
Identity
- Kingdom:
- archaea
Quality
71.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-52
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bpnW02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.75 | 55.0 | 5.21e-01 | 79.1% | 100.0% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.69 | 42.0 | 4.50e-01 | 81.4% | 72.7% |
| 1pxfA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 51.0 | 3.91e-01 | 86.0% | 78.4% |
| 4b6dB00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 51.0 | 4.72e-01 | 83.7% | 66.7% |
| 3l9aX01 | 3.30.720.180 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.66 | 54.0 | 4.69e-01 | 100.0% | 100.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 40.0 | 3.72e-01 | 88.4% | 47.4% |
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.61 | 45.0 | 2.75e-01 | 90.7% | 12.9% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 40.0 | 3.16e-01 | 86.0% | 30.3% |
| 3g4eA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 42.0 | 2.53e-01 | 88.4% | 10.8% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 43.0 | 3.02e-01 | 83.7% | 26.4% |
| 2aklA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.58 | 36.0 | 3.63e-01 | 95.3% | 60.5% |
| 3draB00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.55 | 38.0 | 2.36e-01 | 81.4% | 28.6% |
| 6grsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.33e-01 | 90.7% | 68.4% |
| 7qzqA01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.53 | 39.0 | 2.41e-01 | 90.7% | 27.3% |
| 1tzfA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 37.0 | 2.49e-01 | 88.4% | 43.8% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.51 | 38.0 | 2.39e-01 | 86.0% | 46.5% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 2.90e-01 | 79.1% | 75.0% |
| 5jenA02 | 3.90.640.20 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Heat-shock cognate protein, ATPase | 0.50 | 37.0 | 3.08e-01 | 90.7% | 81.8% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044272 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.83 | 50.0 | 4.76e-01 | 88.4% | 52.0% |
| 3684536 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.73 | 61.0 | 5.05e-01 | 97.7% | 60.0% |
| 3413229 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.73 | 55.0 | 5.28e-01 | 83.7% | 82.0% |
| 3819080 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 53.0 | 4.51e-01 | 83.7% | 56.0% |
| 3933161 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.71 | 55.0 | 5.06e-01 | 83.7% | 69.1% |
| 3688776 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 53.0 | 4.41e-01 | 83.7% | 58.7% |
| 3898995 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.70 | 54.0 | 4.68e-01 | 83.7% | 58.5% |
| 3889754 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.70 | 53.0 | 4.80e-01 | 83.7% | 63.3% |
| 3380774 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.69 | 51.0 | 4.62e-01 | 83.7% | 69.8% |
| 3487738 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.69 | 52.0 | 5.00e-01 | 83.7% | 76.0% |
| 3384844 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.67 | 49.0 | 4.23e-01 | 83.7% | 57.3% |
| 3833354 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.67 | 50.0 | 4.68e-01 | 83.7% | 67.3% |
| 3664051 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.67 | 49.0 | 3.91e-01 | 83.7% | 46.3% |
| 3316230 | 375.1.1.84 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_15 | 0.66 | 50.0 | 4.51e-01 | 83.7% | 65.0% |
| 3606741 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 39.0 | 4.22e-01 | 100.0% | 71.4% |
| 3368259 | 71.1.1.14 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › GPCR_chapero_1 | 0.65 | 48.0 | 3.13e-01 | 93.0% | 17.7% |
| 3830500 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.65 | 50.0 | 4.51e-01 | 86.0% | 71.7% |
| 3811931 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.64 | 48.0 | 4.34e-01 | 86.0% | 79.7% |
| 3803637 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.64 | 49.0 | 4.53e-01 | 83.7% | 76.4% |
| 4028456 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 39.0 | 3.93e-01 | 86.0% | 57.8% |
| 3813944 | 375.4.1.4 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › Zn_ribbon_15 | 0.63 | 48.0 | 3.91e-01 | 83.7% | 48.8% |
| 3445801 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.63 | 46.0 | 4.25e-01 | 83.7% | 68.3% |
| 4929230 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 49.0 | 5.09e-01 | 95.3% | 97.5% |
| 3817565 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.61 | 44.0 | 4.31e-01 | 83.7% | 82.0% |
| 3309813 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.61 | 46.0 | 4.22e-01 | 86.0% | 75.0% |
| 3828759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 46.0 | 4.58e-01 | 95.3% | 82.2% |
| 3355649 | 376.1.1.40 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 | 0.59 | 43.0 | 4.48e-01 | 81.4% | 100.0% |
| 3211857 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.59 | 44.0 | 4.43e-01 | 86.0% | 84.4% |
| 3808899 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.58 | 47.0 | 3.51e-01 | 93.0% | 39.2% |
| 1063651 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.58 | 43.0 | 2.82e-01 | 90.7% | 34.8% |
| 3829244 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.58 | 43.0 | 3.86e-01 | 83.7% | 55.4% |
| 3799127 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.58 | 43.0 | 4.15e-01 | 83.7% | 82.0% |
| 3829858 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.57 | 45.0 | 4.18e-01 | 95.3% | 80.0% |
| 3826536 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.57 | 44.0 | 4.17e-01 | 95.3% | 72.7% |
| 3804146 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.57 | 41.0 | 4.13e-01 | 83.7% | 80.0% |
| 3898826 | 376.1.1.147 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Med16_C | 0.56 | 39.0 | 3.66e-01 | 74.4% | 65.5% |
| 5075724 | 376.1.1.181 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zn_Ribbon_1 | 0.56 | 38.0 | 3.52e-01 | 72.1% | 83.3% |
| 3803132 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.56 | 40.0 | 4.03e-01 | 81.4% | 86.7% |
| 3254799 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 43.0 | 3.10e-01 | 97.7% | 98.1% |
| 4944040 | 375.2.1.0 ↗ | few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like | 0.55 | 35.0 | 3.53e-01 | 81.4% | 55.6% |
| 3594831 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.55 | 41.0 | 4.09e-01 | 83.7% | 82.2% |
| 3178608 | 234.1.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Microbial ribonucleases › Microbial ribonucleases | 0.55 | 44.0 | 3.70e-01 | 100.0% | 60.0% |
| 4321082 | 389.1.1.103 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF30000 | 0.55 | 41.0 | 4.14e-01 | 100.0% | 88.9% |
| 3801981 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.55 | 42.0 | 3.48e-01 | 95.3% | 82.8% |
| 3831215 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.54 | 37.0 | 3.49e-01 | 74.4% | 65.5% |
| 3208844 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.54 | 35.0 | 3.10e-01 | 72.1% | 44.6% |
| 5024283 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.52 | 38.0 | 3.61e-01 | 83.7% | 98.2% |
| 4040325 | 375.4.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › DUF2614 | 0.52 | 34.0 | 3.47e-01 | 100.0% | 65.0% |
| 2323968 | 246.2.1.7 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B | 0.51 | 30.0 | 3.11e-01 | 76.7% | 47.4% |