←Back to structures
IMGVR_UViG_2681813395_000001-2681813395-2684032284
Arc-VirIMGVR_UViG_2681813395_000001-2681813395-2684032284
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-172
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07728.21 best | AAA_5 | 31.8 | 1.90e-07 | 80.4% | 88.5% |
| PF00004.36 | AAA | 25.5 | 2.20e-05 | 80.4% | 69.5% |
D2
medium
residues 175-351
Domain cluster:
rep: LSDeep1_scaffold_41_prodigal-single.1__X__X__00160__D168-358
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zkvA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 46.0 | 2.94e-01 | 83.1% | 35.5% |
| 3t8vA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.55 | 42.0 | 3.41e-01 | 78.5% | 65.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3204910 | 109.4.1.880 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LTN1_E3_ligase_6th | 0.56 | 47.0 | 3.76e-01 | 89.3% | 67.2% |
| 3327408 | 109.4.1.442 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › THOC2_N | 0.53 | 40.0 | 3.21e-01 | 78.0% | 55.7% |