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IMGVR_UViG_2684622505_000001-2684622505-2684646815
Arc-VirIMGVR_UViG_2684622505_000001-2684622505-2684646815
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-56
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lfrA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.77 | 49.0 | 3.85e-01 | 78.6% | 32.4% |
| 4o5fA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 48.0 | 3.78e-01 | 91.1% | 74.8% |
| 4ptsB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 46.0 | 3.26e-01 | 85.7% | 78.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3830955 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.68 | 52.0 | 3.69e-01 | 87.5% | 28.7% |
| 3656632 | 304.112.1.1 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL1 | 0.51 | 41.0 | 3.08e-01 | 96.4% | 83.0% |
D2
medium
residues 57-115
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5yb0J01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.74 | 52.0 | 3.42e-01 | 74.6% | 95.1% |
| 2ld7A00 | 6.10.160.20 | Special › Helix non-globular › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.73 | 53.0 | 4.53e-01 | 83.1% | 48.9% |
| 1a62A01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.72 | 50.0 | 5.46e-01 | 72.9% | 100.0% |
| 4nv1E01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.70 | 56.0 | 3.97e-01 | 89.8% | 42.5% |
| 4uavA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.69 | 50.0 | 4.43e-01 | 91.5% | 52.9% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.68 | 47.0 | 4.82e-01 | 72.9% | 78.2% |
| 2kvdA02 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.68 | 51.0 | 5.14e-01 | 81.4% | 87.9% |
| 2zuvA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.67 | 57.0 | 3.51e-01 | 91.5% | 28.1% |
| 7miqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 43.0 | 3.54e-01 | 89.8% | 36.4% |
| 1m3sB00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.65 | 54.0 | 3.82e-01 | 93.2% | 71.0% |
| 4qozB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.61 | 44.0 | 3.00e-01 | 78.0% | 37.4% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 54.0 | 4.90e-01 | 96.6% | 86.8% |
| 1hjrA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 45.0 | 3.40e-01 | 86.4% | 32.9% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.59 | 47.0 | 4.85e-01 | 86.4% | 100.0% |
| 3oa8A01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.56 | 36.0 | 2.83e-01 | 71.2% | 30.2% |
| 4o5fA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 49.0 | 3.80e-01 | 98.3% | 58.3% |
| 7z67A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 35.0 | 2.40e-01 | 72.9% | 68.3% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3619577 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.89 | 75.0 | 6.40e-01 | 89.8% | 58.9% |
| 3507079 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.82 | 54.0 | 6.23e-01 | 71.2% | 100.0% |
| 3650342 | 130.1.1.10 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP30_Sin3_bdg | 0.82 | 63.0 | 6.75e-01 | 83.1% | 100.0% |
| None | — | 0.80 | 58.0 | 3.55e-01 | 76.3% | 24.1% | |
| 3249598 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.78 | 68.0 | 6.49e-01 | 100.0% | 91.4% |
| 4616848 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.77 | 53.0 | 5.88e-01 | 72.9% | 95.6% |
| 3598653 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.76 | 50.0 | 5.51e-01 | 71.2% | 88.9% |
| 3611122 | 130.1.1.32 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP_RNF34_RFFL (DEPRECATED) | 0.75 | 60.0 | 6.19e-01 | 93.2% | 92.7% |
| 3272915 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.75 | 55.0 | 5.64e-01 | 79.7% | 92.7% |
| 4241485 | 130.1.1.20 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › HeH | 0.74 | 51.0 | 5.28e-01 | 74.6% | 78.2% |
| 3191312 | 130.1.1.16 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Ish1 | 0.74 | 51.0 | 5.59e-01 | 72.9% | 95.6% |
| 3273440 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.74 | 65.0 | 5.38e-01 | 100.0% | 57.1% |
| 3252664 | 130.1.1.31 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › RNF34L-like_3rd | 0.74 | 52.0 | 5.42e-01 | 76.3% | 89.1% |
| 3198528 | 130.1.1.16 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Ish1 | 0.74 | 50.0 | 5.17e-01 | 71.2% | 76.4% |
| 1826874 | 130.1.1.10 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP30_Sin3_bdg | 0.73 | 53.0 | 5.34e-01 | 81.4% | 77.6% |
| 3612921 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.73 | 57.0 | 5.92e-01 | 88.1% | 100.0% |
| 3709590 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 59.0 | 4.53e-01 | 91.5% | 43.6% |
| 3520581 | 130.1.1.8 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › ARMET_C | 0.72 | 49.0 | 5.40e-01 | 71.2% | 95.6% |
| 4260463 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.72 | 50.0 | 5.48e-01 | 74.6% | 95.6% |
| 3248928 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.72 | 53.0 | 5.48e-01 | 79.7% | 85.5% |
| 3712494 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.72 | 54.0 | 5.60e-01 | 83.1% | 96.4% |
| 3943133 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.72 | 50.0 | 5.48e-01 | 74.6% | 95.6% |
| 3716587 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.72 | 50.0 | 5.18e-01 | 74.6% | 87.3% |
| 3127 | 130.1.1.7 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Endonuc-dimeris | 0.72 | 50.0 | 5.22e-01 | 74.6% | 85.2% |
| 3724166 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.72 | 52.0 | 5.08e-01 | 78.0% | 75.4% |
| 5028635 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.72 | 62.0 | 4.71e-01 | 100.0% | 53.1% |
| 4433184 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.72 | 50.0 | 5.21e-01 | 74.6% | 80.0% |
| 4013599 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.71 | 57.0 | 3.59e-01 | 89.8% | 26.7% |
| 3616464 | 130.1.1.10 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP30_Sin3_bdg | 0.70 | 51.0 | 5.20e-01 | 84.7% | 79.3% |
| 3880529 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.70 | 51.0 | 5.00e-01 | 86.4% | 70.8% |
| 3690457 | 130.1.1.16 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Ish1 | 0.70 | 51.0 | 5.15e-01 | 79.7% | 81.7% |
| 3590596 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.70 | 49.0 | 5.44e-01 | 74.6% | 100.0% |
| 5019781 | 5001.1.1.293 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › MASE3 | 0.70 | 57.0 | 3.77e-01 | 88.1% | 50.4% |
| 3568558 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.69 | 48.0 | 4.83e-01 | 74.6% | 76.7% |
| 3329872 | 3409.1.1.3 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › ATG14 | 0.69 | 49.0 | 3.49e-01 | 76.3% | 88.9% |
| 3271283 | 130.1.1.20 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › HeH | 0.69 | 47.0 | 4.77e-01 | 72.9% | 80.0% |
| 3707326 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 54.0 | 4.02e-01 | 88.1% | 34.0% |
| 3192001 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.68 | 55.0 | 4.22e-01 | 89.8% | 75.7% |
| 3190964 | 130.1.1.20 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › HeH | 0.68 | 54.0 | 5.58e-01 | 88.1% | 94.5% |
| 4026837 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.68 | 51.0 | 3.08e-01 | 83.1% | 97.4% |
| 3810589 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 61.0 | 3.62e-01 | 100.0% | 14.4% |
| 3252602 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.67 | 55.0 | 3.16e-01 | 93.2% | 8.8% |
| 1505698 | 130.1.1.8 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › ARMET_C | 0.67 | 48.0 | 4.74e-01 | 78.0% | 70.8% |
| 3614917 | 130.1.1.31 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › RNF34L-like_3rd | 0.66 | 51.0 | 5.24e-01 | 83.1% | 89.1% |
| 3635200 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.66 | 43.0 | 4.50e-01 | 72.9% | 72.7% |
| 3256882 | 103.8.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_domain_II | 0.65 | 45.0 | 4.30e-01 | 72.9% | 77.1% |
| 3741792 | 103.8.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_domain_II | 0.64 | 47.0 | 4.40e-01 | 78.0% | 76.0% |
| 4386708 | 130.1.1.49 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › PF27388 | 0.64 | 47.0 | 4.32e-01 | 81.4% | 66.3% |
| 3254598 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.64 | 55.0 | 5.23e-01 | 96.6% | 97.1% |
| 4947073 | 103.8.1.3 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_C | 0.64 | 43.0 | 4.01e-01 | 71.2% | 73.3% |
| 4025289 | 192.29.1.197 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4110 | 0.63 | 53.0 | 4.76e-01 | 94.9% | 65.9% |
| 4937385 | 103.8.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein AF0491, middle domain › Hypothetical protein AF0491, middle domain › SBDS_domain_II | 0.63 | 43.0 | 3.99e-01 | 71.2% | 72.0% |
| 3178397 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 48.0 | 3.39e-01 | 91.5% | 43.2% |