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IMGVR_UViG_2684622505_000002-2684622505-2684645323
Arc-VirIMGVR_UViG_2684622505_000002-2684622505-2684645323
Identity
- Kingdom:
- archaea
Quality
72.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-91_198-211
Domain cluster:
rep: KU160495.1__ALY08055.1__EauS123_00056__00056__D9-107
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06114.20 best | Peptidase_M78 | 32.8 | 7.50e-08 | 74.8% | 50.8% |
D2
medium
residues 92-177
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06114.20 best | Peptidase_M78 | 24.4 | 3.10e-05 | 68.6% | 39.3% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ivnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 42.0 | 4.42e-01 | 70.9% | 67.1% |
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.66 | 47.0 | 4.86e-01 | 76.7% | 92.7% |
| 8e9gE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.63 | 44.0 | 4.94e-01 | 73.3% | 100.0% |
| 3juiA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 48.0 | 3.89e-01 | 84.9% | 53.4% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 4.37e-01 | 75.6% | 81.3% |
| 7vw6B01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.60 | 44.0 | 4.76e-01 | 84.9% | 100.0% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 39.0 | 3.54e-01 | 70.9% | 90.8% |
| 4p9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 4.23e-01 | 72.1% | 91.0% |
| 3p3lA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.55 | 44.0 | 2.90e-01 | 89.5% | 62.3% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 38.0 | 3.28e-01 | 77.9% | 55.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3987779 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 73.0 | 7.17e-01 | 87.2% | 85.6% |
| 3953982 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.86 | 75.0 | 5.49e-01 | 93.0% | 40.0% |
| 3989086 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.82 | 72.0 | 5.47e-01 | 94.2% | 45.3% |
| 3953551 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.81 | 69.0 | 5.11e-01 | 93.0% | 38.5% |
| 4950654 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.81 | 71.0 | 5.34e-01 | 93.0% | 42.6% |
| 3219208 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 50.0 | 5.35e-01 | 72.1% | 80.0% |
| 5028152 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 45.0 | 5.07e-01 | 74.4% | 81.5% |
| 3942057 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.73 | 40.0 | 4.83e-01 | 87.2% | 83.6% |
| 3500206 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 49.0 | 5.18e-01 | 76.7% | 78.7% |
| 3997838 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.70 | 44.0 | 4.94e-01 | 75.6% | 83.1% |
| 5027752 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 42.0 | 4.41e-01 | 72.1% | 68.8% |
| 3818566 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.67 | 43.0 | 4.27e-01 | 77.9% | 62.2% |
| 3346951 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 51.0 | 4.25e-01 | 83.7% | 66.5% |
| 4943203 | 101.1.1.19 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB | 0.65 | 47.0 | 4.14e-01 | 76.7% | 52.0% |
| 3703501 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 50.0 | 4.65e-01 | 84.9% | 71.8% |
| 3417699 | 101.1.1.19 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB | 0.62 | 45.0 | 3.88e-01 | 76.7% | 48.9% |
| 5019249 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 46.0 | 4.70e-01 | 81.4% | 100.0% |
| 3941971 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.50 | 37.0 | 3.60e-01 | 81.4% | 99.0% |