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IMGVR_UViG_2684622506_000001-2684622506-2684651356

Arc-Vir

Identity

Accession:: IMGVR_UViG_2684622506_000001-2684622506-2684651356 ↗
Kingdom:: archaea

Quality

78.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-73

PDB

Domain cluster: representative

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1n81A00	1.10.3030.10	Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27	0.59	41.0	2.95e-01	74.2%	91.4%
1hlvA02	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.57	39.0	3.99e-01	71.0%	75.0%
1cptA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.56	45.0	2.80e-01	93.5%	55.1%
2a5yB01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.56	40.0	3.40e-01	77.4%	100.0%
2lmgA00	1.20.1270.10	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.55	43.0	4.09e-01	85.5%	100.0%
6mh4A03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.55	37.0	3.50e-01	71.0%	83.5%
2erbA01	1.10.238.20	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain	0.54	37.0	3.12e-01	71.0%	46.7%
7xuxB01	1.10.3290.10	Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain	0.54	44.0	3.12e-01	100.0%	73.6%
3obyA03	3.30.1330.30	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12	0.53	38.0	3.26e-01	75.8%	100.0%
3cvvA02	1.25.40.80	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.53	38.0	3.01e-01	77.4%	67.9%
3vtiA07	1.10.357.160	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 ›	0.52	41.0	3.14e-01	85.5%	74.1%
2qm3A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	36.0	3.30e-01	74.2%	91.6%
4ci1B03	1.20.58.1480	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.51	39.0	3.78e-01	83.9%	98.6%
3h2zA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.51	43.0	3.19e-01	98.4%	44.3%
2rbdA01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.51	40.0	3.04e-01	85.5%	64.0%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4028200	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.75	52.0	3.31e-01	72.6%	15.3%
3820042	4336.2.1.0 ↗	alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1	0.61	38.0	3.15e-01	75.8%	35.5%
3963955	6056.1.1.2 ↗	alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N	0.59	44.0	4.34e-01	80.6%	80.0%
3588628	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.56	39.0	4.07e-01	72.6%	100.0%
4292146	6056.1.1.2 ↗	alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N	0.55	41.0	3.90e-01	82.3%	70.7%
3391989	7015.1.1.2 ↗	alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › XK-related	0.52	45.0	2.83e-01	100.0%	72.6%