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IMGVR_UViG_2684622740_000002-2684622740-2685517102
Arc-VirIMGVR_UViG_2684622740_000002-2684622740-2685517102
Identity
- Kingdom:
- archaea
Quality
90.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-72
Domain cluster:
rep: MW388005.1__QQO39020.1__X__00046__D8-66
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01471.24 best | PG_binding_1 | 51.8 | 1.10e-13 | 91.8% | 94.7% |
D2
high
residues 89-246
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00105__D20-173
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13529.14 best | Peptidase_C39_2 | 66.2 | 6.50e-18 | 89.9% | 80.6% |
| PF12385.15 | Peptidase_C70 | 20.7 | 4.60e-04 | 88.0% | 83.7% |
| PF03412.22 | Peptidase_C39 | 52.7 | 5.80e-14 | 85.4% | 82.0% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.91 | 73.0 | 7.73e-01 | 95.6% | 92.2% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.90 | 73.0 | 8.00e-01 | 93.7% | 99.2% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.86 | 66.0 | 7.41e-01 | 94.3% | 99.2% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.85 | 81.0 | 7.24e-01 | 99.4% | 90.5% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.84 | 65.0 | 7.09e-01 | 92.4% | 95.4% |
| 3ervA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.82 | 79.0 | 7.16e-01 | 100.0% | 97.5% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.79 | 75.0 | 7.24e-01 | 99.4% | 97.7% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.64 | 49.0 | 5.44e-01 | 91.8% | 99.2% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.64 | 57.0 | 4.55e-01 | 94.9% | 98.7% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.64 | 57.0 | 5.13e-01 | 97.5% | 70.9% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 26.0 | 3.97e-01 | 82.9% | 93.8% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.63 | 57.0 | 5.39e-01 | 97.5% | 96.8% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 28.0 | 3.88e-01 | 81.6% | 84.8% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 26.0 | 3.41e-01 | 97.5% | 70.9% |
| 3a7sA00 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.59 | 44.0 | 4.03e-01 | 75.9% | 100.0% |
| 3phuA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.56 | 39.0 | 3.98e-01 | 71.5% | 83.0% |
| 1si5H01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 30.0 | 3.44e-01 | 94.3% | 73.1% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.53 | 23.0 | 3.34e-01 | 98.1% | 93.9% |
| 1xd3C00 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.52 | 46.0 | 4.03e-01 | 92.4% | 99.6% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 38.0 | 3.34e-01 | 73.4% | 99.6% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2570822 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.92 | 76.0 | 7.99e-01 | 98.1% | 92.4% |
| 4261492 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.92 | 74.0 | 8.03e-01 | 98.7% | 96.3% |
| 2444014 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.92 | 75.0 | 7.98e-01 | 100.0% | 93.7% |
| 4562486 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.91 | 79.0 | 7.98e-01 | 100.0% | 90.3% |
| 5056599 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.90 | 82.0 | 8.50e-01 | 98.7% | 100.0% |
| 3987478 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.90 | 71.0 | 7.84e-01 | 98.1% | 99.2% |
| 5035935 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.89 | 85.0 | 7.93e-01 | 98.1% | 94.1% |
| 3947337 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.89 | 71.0 | 7.26e-01 | 98.7% | 83.9% |
| 3792183 | 219.1.1.94 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › ACTMAP-like_C | 0.89 | 85.0 | 7.34e-01 | 100.0% | 87.4% |
| 5030431 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.89 | 86.0 | 7.97e-01 | 100.0% | 87.4% |
| 3223487 | 219.1.1.94 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › ACTMAP-like_C | 0.88 | 85.0 | 7.43e-01 | 100.0% | 91.8% |
| 4405252 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.88 | 74.0 | 7.84e-01 | 97.5% | 97.1% |
| 3255741 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.87 | 81.0 | 7.74e-01 | 96.8% | 100.0% |
| 5061293 | 219.1.1.77 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 | 0.87 | 83.0 | 7.33e-01 | 99.4% | 94.4% |
| 3566940 | 219.1.1.78 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 | 0.87 | 83.0 | 7.23e-01 | 100.0% | 99.6% |
| 5039793 | 219.1.1.77 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 | 0.87 | 81.0 | 7.31e-01 | 97.5% | 99.5% |
| 4046385 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.87 | 70.0 | 7.50e-01 | 96.8% | 94.3% |
| 3972041 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.87 | 78.0 | 7.81e-01 | 100.0% | 92.5% |
| 3643302 | 219.1.1.78 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 | 0.86 | 83.0 | 7.26e-01 | 100.0% | 97.3% |
| 5046498 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.86 | 83.0 | 8.20e-01 | 100.0% | 97.6% |
| 3450694 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.86 | 82.0 | 7.36e-01 | 100.0% | 89.5% |
| 3970579 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.86 | 73.0 | 7.51e-01 | 96.8% | 92.0% |
| 3299363 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.86 | 82.0 | 7.25e-01 | 100.0% | 87.4% |
| 3972956 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.85 | 72.0 | 7.53e-01 | 100.0% | 94.5% |
| 185622 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.85 | 65.0 | 7.03e-01 | 93.0% | 91.2% |
| 2712021 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.85 | 81.0 | 7.13e-01 | 100.0% | 86.8% |
| 5046286 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.85 | 80.0 | 7.13e-01 | 99.4% | 94.4% |
| 3278485 | 219.1.1.49 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C70 | 0.84 | 81.0 | 7.56e-01 | 100.0% | 84.3% |
| 3260732 | 219.1.1.78 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 | 0.84 | 81.0 | 7.21e-01 | 100.0% | 99.0% |
| 5018522 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.84 | 77.0 | 6.89e-01 | 99.4% | 72.7% |
| 4957284 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.84 | 78.0 | 7.54e-01 | 98.1% | 100.0% |
| 5073781 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.84 | 79.0 | 7.33e-01 | 100.0% | 95.4% |
| 3615365 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.83 | 79.0 | 6.84e-01 | 100.0% | 97.0% |
| 4977576 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.83 | 79.0 | 7.11e-01 | 100.0% | 99.0% |
| 3968842 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.83 | 63.0 | 6.87e-01 | 93.0% | 94.6% |
| 5034437 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.83 | 79.0 | 6.57e-01 | 100.0% | 98.0% |
| 4937587 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.83 | 78.0 | 7.69e-01 | 99.4% | 93.9% |
| 4978411 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.81 | 76.0 | 7.27e-01 | 99.4% | 98.9% |
| 3589934 | 219.1.1.34 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C47 | 0.81 | 77.0 | 7.54e-01 | 99.4% | 98.2% |
| 5012604 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.80 | 77.0 | 6.88e-01 | 100.0% | 94.8% |
| 5034263 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 76.0 | 6.10e-01 | 100.0% | 98.6% |
| 5055984 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 60.0 | 6.45e-01 | 90.5% | 94.8% |
| 3238915 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.77 | 71.0 | 5.51e-01 | 97.5% | 74.3% |
| 2141735 | 219.1.1.69 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE | 0.76 | 72.0 | 6.62e-01 | 100.0% | 96.4% |
| 4669027 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.74 | 67.0 | 5.78e-01 | 96.2% | 81.7% |
| 4265943 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.74 | 68.0 | 5.41e-01 | 97.5% | 77.3% |
| 4608704 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.72 | 65.0 | 5.59e-01 | 96.2% | 81.2% |
| 3404595 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.67 | 61.0 | 5.81e-01 | 97.5% | 91.7% |
| 5033672 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 59.0 | 5.47e-01 | 96.2% | 97.9% |
| 3249973 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.64 | 58.0 | 5.81e-01 | 95.6% | 100.0% |
| 1144780 | 219.1.1.69 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE | 0.64 | 49.0 | 5.44e-01 | 91.8% | 99.2% |
| 3399912 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 31.0 | 4.35e-01 | 91.1% | 100.0% |
| 3230168 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.64 | 57.0 | 4.58e-01 | 96.8% | 96.1% |
| 3224441 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 26.0 | 3.89e-01 | 79.1% | 88.2% |
| 3514867 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 27.0 | 3.76e-01 | 79.7% | 81.3% |
| 3790897 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 35.0 | 4.18e-01 | 92.4% | 88.0% |
| 3236054 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.60 | 30.0 | 4.10e-01 | 90.5% | 100.0% |
| 3495480 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 24.0 | 3.49e-01 | 82.9% | 96.7% |
| 3482683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 24.0 | 3.55e-01 | 98.7% | 100.0% |
| 3720140 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.52 | 41.0 | 3.47e-01 | 98.1% | 51.2% |