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IMGVR_UViG_2724679704_000001-2724679704-2727828043

Arc-Vir

IMGVR_UViG_2724679704_000001-2724679704-2727828043

Identity

Kingdom:
archaea

Quality

74.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-101
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.88 73.0 7.34e-01 100.0% 87.5%
1cr5A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.86 65.0 7.28e-01 90.7% 98.7%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.86 69.0 7.41e-01 89.7% 97.6%
1cz4A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.85 73.0 7.56e-01 94.8% 95.7%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.85 68.0 7.25e-01 91.8% 96.4%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.83 65.0 7.06e-01 91.8% 98.8%
1aw8B00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.82 54.0 5.60e-01 73.2% 71.4%
1dmrA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.82 70.0 5.76e-01 89.7% 79.1%
1twfA03 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.82 66.0 6.50e-01 91.8% 81.2%
1ti2A04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.82 70.0 5.88e-01 90.7% 89.0%
1g8kA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.81 70.0 6.11e-01 89.7% 83.7%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.80 65.0 6.31e-01 94.8% 78.3%
8e9gG01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.80 67.0 6.69e-01 87.6% 100.0%
6cz7C02 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.80 64.0 5.74e-01 84.5% 100.0%
1y5lA02 3.40.50.12440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.80 74.0 4.10e-01 99.0% 13.0%
1h0hA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.80 69.0 5.50e-01 90.7% 73.9%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.80 67.0 6.30e-01 88.7% 99.1%
1yleA02 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.79 50.0 6.02e-01 89.7% 95.4%
2ki8A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.79 68.0 6.21e-01 91.8% 86.4%
1q16A13 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.78 73.0 6.16e-01 99.0% 85.3%
7nz1G01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.78 65.0 6.57e-01 87.6% 100.0%
7eu1A01 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.76 69.0 5.99e-01 96.9% 78.2%
1ogyA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.76 70.0 6.43e-01 97.9% 95.1%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.75 66.0 6.54e-01 94.8% 96.1%
1ynjD04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.75 68.0 5.87e-01 96.9% 87.6%
2vpzA05 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.74 69.0 5.75e-01 99.0% 81.1%
2e7zA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.74 69.0 5.70e-01 100.0% 84.5%
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.73 63.0 6.39e-01 91.8% 98.9%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.70 66.0 6.55e-01 99.0% 99.0%
2kqaA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.69 57.0 5.27e-01 87.6% 90.8%
3m3gA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.68 57.0 5.25e-01 88.7% 93.3%
2ae0X01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.65 59.0 4.79e-01 100.0% 97.2%
2d9rA00 2.40.30.100 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like 0.63 50.0 5.31e-01 93.8% 96.5%
4gr5C01 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.62 27.0 3.26e-01 79.4% 60.9%
5b6iA02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.60 54.0 5.28e-01 100.0% 95.3%
2greF02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.60 45.0 4.89e-01 90.7% 98.7%
3thpA02 2.60.120.1520 Mainly Beta › Sandwich › Jelly Rolls › 0.56 35.0 3.03e-01 93.8% 40.1%
2vecA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 33.0 3.10e-01 93.8% 45.2%
4zciA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 48.0 4.74e-01 100.0% 91.1%
3p42A03 3.10.560.10 Alpha Beta › Roll › Outer membrane lipoprotein wza fold like › Outer membrane lipoprotein wza domain like 0.56 39.0 4.30e-01 100.0% 94.6%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 4.11e-01 89.7% 94.1%
3fqmA01 2.20.25.210 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B 0.54 31.0 3.70e-01 86.6% 90.2%
4dguA01 2.60.40.2680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 3.65e-01 83.5% 64.3%
1vajA02 3.30.1490.150 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Hypothetical protein ph0010; domain 2 0.53 38.0 4.16e-01 93.8% 98.6%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.52 36.0 4.14e-01 100.0% 97.2%
1wgyA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 35.0 3.79e-01 100.0% 92.1%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5076554 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.94 74.0 8.12e-01 87.6% 97.5%
4097451 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.92 78.0 8.36e-01 91.8% 100.0%
5079577 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.92 71.0 7.80e-01 86.6% 96.2%
4200720 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.91 74.0 7.92e-01 89.7% 96.5%
5060583 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.90 75.0 8.02e-01 99.0% 98.8%
1883479 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.90 78.0 8.11e-01 94.8% 97.8%
4943791 1.1.2.45 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 0.90 74.0 7.93e-01 89.7% 97.6%
5001485 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.90 73.0 7.80e-01 89.7% 96.5%
4241168 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.90 71.0 7.81e-01 88.7% 100.0%
4948370 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.90 75.0 6.54e-01 91.8% 61.6%
4967302 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 76.0 7.94e-01 100.0% 95.6%
4445483 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.89 72.0 7.73e-01 89.7% 96.5%
5037727 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 72.0 7.64e-01 89.7% 95.3%
4205030 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 72.0 7.71e-01 89.7% 96.5%
4970875 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 72.0 7.71e-01 90.7% 96.5%
5076635 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 73.0 7.78e-01 90.7% 97.6%
5041263 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 72.0 7.69e-01 89.7% 96.5%
5060748 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 75.0 7.18e-01 92.8% 78.2%
4995354 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 73.0 7.79e-01 89.7% 97.6%
4488210 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.89 71.0 7.60e-01 89.7% 95.3%
4927622 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.89 76.0 7.94e-01 92.8% 96.7%
4931749 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.89 72.0 7.65e-01 89.7% 96.5%
3706161 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 71.0 7.58e-01 93.8% 95.3%
4986590 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 71.0 7.57e-01 89.7% 95.3%
4979696 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 73.0 7.76e-01 90.7% 97.6%
4024752 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 75.0 7.44e-01 100.0% 86.0%
4947745 1.1.2.45 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 0.88 77.0 7.98e-01 93.8% 97.8%
5028227 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 73.0 7.80e-01 89.7% 98.8%
4970929 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 72.0 7.67e-01 90.7% 97.6%
5055583 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 72.0 7.67e-01 89.7% 97.6%
5045002 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 70.0 7.31e-01 89.7% 90.0%
3409396 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.88 73.0 7.07e-01 100.0% 80.0%
4938645 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.88 71.0 7.64e-01 88.7% 96.5%
3486347 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 75.0 7.59e-01 95.9% 91.6%
4970084 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.88 74.0 7.87e-01 89.7% 100.0%
4943103 1.1.2.45 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 0.87 72.0 7.72e-01 89.7% 98.8%
5073963 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.87 72.0 7.69e-01 99.0% 98.8%
5052052 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.87 74.0 7.56e-01 94.8% 91.6%
4981335 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.87 71.0 7.57e-01 90.7% 97.6%
4526788 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.87 68.0 7.45e-01 88.7% 98.8%
5043151 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.87 67.0 7.34e-01 86.6% 97.5%
5074498 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.86 77.0 7.16e-01 96.9% 78.3%
4995073 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.86 73.0 7.76e-01 87.6% 100.0%
5069203 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.86 72.0 7.49e-01 92.8% 94.4%
4607187 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.86 72.0 7.33e-01 100.0% 90.5%
4263053 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 69.0 7.33e-01 89.7% 96.5%
3169042 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 75.0 7.44e-01 100.0% 89.0%
5053341 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.85 76.0 7.53e-01 94.8% 91.0%
5053173 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 74.0 7.56e-01 100.0% 93.7%
3186315 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 76.0 7.51e-01 93.8% 97.0%
3611762 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.85 75.0 7.57e-01 99.0% 93.7%
4991006 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 68.0 7.23e-01 91.8% 95.3%
5001338 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.85 75.0 7.62e-01 97.9% 94.7%
3783660 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 75.0 7.46e-01 100.0% 90.0%
4954799 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.85 76.0 7.67e-01 96.9% 95.8%
5054391 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.85 68.0 7.29e-01 90.7% 96.5%
31 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.84 73.0 7.56e-01 95.9% 97.8%
5060218 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.84 69.0 7.36e-01 89.7% 98.8%
4979744 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.83 73.0 6.53e-01 92.8% 85.4%
5032396 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.83 75.0 7.47e-01 95.9% 95.0%
3740397 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.83 69.0 7.03e-01 87.6% 100.0%
3725766 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.83 73.0 7.40e-01 99.0% 94.7%
3684407 1.1.2.35 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF26429 0.82 77.0 6.33e-01 100.0% 89.1%
3748306 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.82 73.0 7.44e-01 99.0% 96.8%
5042283 208.1.1.56 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › MazE_antitoxin 0.82 74.0 5.07e-01 96.9% 33.8%
3287818 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.81 70.0 5.85e-01 90.7% 83.2%
3352481 1.1.2.35 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF26429 0.81 75.0 6.46e-01 99.0% 96.6%
4992324 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.81 69.0 5.41e-01 90.7% 85.8%
3972722 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.80 69.0 6.16e-01 90.7% 90.0%
4639326 1.1.2.6 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.80 66.0 6.34e-01 94.8% 77.3%
4670243 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 69.0 6.83e-01 92.8% 95.0%
3412967 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.79 67.0 7.00e-01 99.0% 97.8%
4027672 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.78 70.0 6.79e-01 94.8% 90.5%
3605376 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.78 67.0 6.82e-01 91.8% 97.9%
4354975 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 67.0 5.58e-01 100.0% 55.6%
3617423 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.78 68.0 6.89e-01 100.0% 94.7%
3722497 1.1.2.22 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N_fung 0.77 63.0 6.49e-01 87.6% 93.3%
3933010 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 68.0 6.65e-01 100.0% 87.6%
5043595 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 63.0 5.97e-01 88.7% 94.8%
4863286 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.75 60.0 6.34e-01 100.0% 97.7%
3406944 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 70.0 6.08e-01 100.0% 72.1%
5000887 1.1.2.4 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.75 70.0 6.25e-01 99.0% 86.2%
5077330 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 69.0 6.72e-01 99.0% 98.1%
5018370 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 62.0 5.95e-01 89.7% 96.4%
3781180 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 68.0 6.50e-01 100.0% 97.3%
4985683 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 59.0 5.77e-01 84.5% 95.2%
1568967 1.1.2.24 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › KWL1 0.73 68.0 5.39e-01 100.0% 66.1%
4982935 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 61.0 5.78e-01 89.7% 93.8%
3343849 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 61.0 6.17e-01 89.7% 93.7%
3575767 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 67.0 6.41e-01 100.0% 92.7%
5070184 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 60.0 5.74e-01 89.7% 94.5%
4081895 1.1.2.16 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD 0.72 59.0 5.36e-01 88.7% 93.8%
3596622 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 61.0 5.80e-01 92.8% 95.7%
3218726 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 65.0 6.44e-01 100.0% 96.0%
3591362 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 58.0 5.64e-01 87.6% 100.0%
4988786 1.1.2.16 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD 0.67 56.0 5.53e-01 90.7% 91.4%
4948295 1.1.2.16 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD 0.67 56.0 4.51e-01 91.8% 56.8%
3386884 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 54.0 5.12e-01 89.7% 97.5%
3627366 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.66 57.0 5.67e-01 92.8% 95.0%
3701559 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.64 58.0 5.41e-01 100.0% 89.2%
D2 high residues 109-183
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.61 45.0 3.97e-01 80.0% 96.6%
2moqA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 45.0 3.72e-01 84.0% 76.4%
3q0xA01 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.55 39.0 3.10e-01 74.7% 72.9%
2qv8A00 3.55.40.10 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain 0.53 43.0 3.64e-01 96.0% 93.8%
1xr0B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 4.13e-01 94.7% 95.6%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.90e-01 94.7% 81.8%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 37.0 3.47e-01 76.0% 92.7%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 35.0 2.93e-01 77.3% 37.6%
1d8hA00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.51 37.0 2.53e-01 76.0% 64.6%
3p9vA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 36.0 2.97e-01 76.0% 77.8%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 35.0 3.49e-01 74.7% 100.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3926809 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.60 52.0 4.92e-01 100.0% 85.6%
3989262 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.59 38.0 4.32e-01 94.7% 98.0%
4276756 220.1.1.9 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs 0.57 46.0 3.81e-01 94.7% 72.9%
3260906 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.56 40.0 3.65e-01 76.0% 70.5%
3315619 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 39.0 2.63e-01 74.7% 26.0%
3251731 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.54 46.0 3.73e-01 98.7% 69.0%
3828854 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.54 44.0 3.73e-01 93.3% 77.8%
3271483 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.54 46.0 3.55e-01 100.0% 56.3%
3909375 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.54 44.0 3.72e-01 94.7% 63.7%
3719938 227.1.1.17 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_N 0.53 45.0 3.81e-01 100.0% 81.4%
4955327 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 35.0 3.86e-01 100.0% 90.9%
None — 0.53 43.0 3.71e-01 94.7% 66.2%
3926774 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.53 44.0 3.73e-01 98.7% 77.1%
3353407 331.10.1.1 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.52 36.0 2.46e-01 73.3% 68.8%
3596476 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.52 44.0 3.70e-01 100.0% 85.3%
4085451 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.52 42.0 3.80e-01 93.3% 90.0%
4941310 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.51 42.0 3.44e-01 94.7% 70.3%
3962048 227.1.1.15 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PF26035 0.51 44.0 4.08e-01 100.0% 76.0%
3728770 220.1.1.201 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 0.51 41.0 3.74e-01 94.7% 98.2%
868467 274.1.1.13 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › GspH 0.51 41.0 3.49e-01 96.0% 90.1%
3604237 4333.1.1.2 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C 0.50 40.0 3.01e-01 96.0% 61.3%
5039311 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.50 41.0 3.36e-01 93.3% 70.0%
3625037 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.50 42.0 3.62e-01 100.0% 84.4%
D3 high residues 314-378
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cqnA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.66 46.0 4.35e-01 72.3% 62.3%
1hx8A01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 50.0 4.18e-01 83.1% 65.3%
4u04B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 50.0 4.57e-01 86.2% 71.6%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.63 48.0 3.68e-01 83.1% 44.2%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.63 53.0 4.21e-01 96.9% 97.1%
6xssA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 48.0 4.75e-01 86.2% 92.8%
4f9cA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.61 49.0 3.55e-01 90.8% 95.9%
6tkyA03 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.60 48.0 4.01e-01 90.8% 84.4%
3f2eA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 42.0 3.92e-01 75.4% 67.5%
2b1eA04 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.59 49.0 4.12e-01 98.5% 80.3%
4kd6A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.56 47.0 3.30e-01 95.4% 41.4%
4g3vA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 38.0 2.89e-01 73.8% 97.5%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.53 41.0 3.36e-01 86.2% 51.1%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.53 44.0 3.90e-01 95.4% 66.3%
4wr4A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 38.0 3.43e-01 81.5% 92.4%
3zssA02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 38.0 3.63e-01 80.0% 84.8%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 41.0 2.98e-01 98.5% 48.7%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3219509 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.70 56.0 4.31e-01 86.2% 42.1%
4939956 109.4.1.95 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.69 56.0 3.72e-01 87.7% 40.4%
4353495 563.1.1.1 ↗ alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.68 46.0 3.29e-01 70.8% 27.4%
None — 0.67 59.0 3.97e-01 100.0% 38.0%
4026102 592.1.1.1 ↗ alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI 0.64 47.0 4.59e-01 81.5% 70.7%
3894562 611.3.1.0 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.63 50.0 4.34e-01 90.8% 65.5%
3860669 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 50.0 3.63e-01 90.8% 30.2%
3605918 109.4.1.602 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 0.63 52.0 3.23e-01 98.5% 20.7%
4536901 563.1.1.1 ↗ alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.63 42.0 3.18e-01 70.8% 30.0%
3938466 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 43.0 3.88e-01 75.4% 68.4%
5071518 109.4.1.207 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 0.60 48.0 3.87e-01 92.3% 44.4%
3428600 185.1.1.0 ↗ alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 0.53 44.0 4.19e-01 96.9% 82.5%
3909938 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.53 36.0 3.33e-01 72.3% 72.2%
D4 medium residues 198-296
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26404.1 best DUF8102 32.9 7.50e-08 95.0% 36.2%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.55 39.0 3.46e-01 74.7% 72.1%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 40.0 3.93e-01 97.0% 74.5%
2i15A02 1.20.120.510 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › mg296 homolog like 0.51 38.0 4.06e-01 97.0% 94.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3928036 109.4.1.1181 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Epg5_2 0.64 57.0 3.65e-01 99.0% 45.7%
4025161 6155.1.1.1 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.61 36.0 3.95e-01 72.7% 72.5%
3209033 109.4.1.401 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NRDE-2 0.58 49.0 2.88e-01 92.9% 22.5%
3800111 5067.1.1.3 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.57 49.0 2.90e-01 97.0% 95.6%
3606810 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.54 40.0 3.22e-01 77.8% 47.9%
3764767 6155.1.1.2 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.52 40.0 3.65e-01 81.8% 90.0%
3456211 103.9.1.2 ↗ alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain › CPP1-like 0.51 37.0 4.06e-01 77.8% 96.2%
3270709 109.4.1.15 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS 0.51 43.0 3.89e-01 97.0% 87.6%
3589751 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.50 35.0 3.17e-01 73.7% 89.0%