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IMGVR_UViG_2728369221_000001-2728369221-2729668419
Arc-VirIMGVR_UViG_2728369221_000001-2728369221-2729668419
Identity
- Kingdom:
- archaea
Quality
87.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-62
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7b7tA01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.67 | 49.0 | 3.53e-01 | 78.6% | 46.6% |
| 2aplA01 | 1.10.8.330 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.66 | 57.0 | 5.40e-01 | 98.2% | 100.0% |
| 6cnzF00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.66 | 51.0 | 3.75e-01 | 87.5% | 96.8% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 55.0 | 3.98e-01 | 94.6% | 98.7% |
| 3akaA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 55.0 | 3.89e-01 | 98.2% | 55.6% |
| 1yqgA02 | 1.10.3730.10 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like | 0.61 | 45.0 | 3.58e-01 | 80.4% | 90.3% |
| 6dewA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 52.0 | 3.61e-01 | 96.4% | 70.0% |
| 1mkiA02 | 1.10.1500.10 | Mainly Alpha › Orthogonal Bundle › Probable Glutaminase Ybgj; Chain: A, domain 2 › | 0.59 | 42.0 | 3.10e-01 | 75.0% | 48.6% |
| 4zpxA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 50.0 | 4.24e-01 | 94.6% | 63.0% |
| 2f33A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 47.0 | 4.10e-01 | 89.3% | 59.8% |
| 1q2lA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.58 | 49.0 | 3.28e-01 | 100.0% | 23.8% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.53 | 38.0 | 4.07e-01 | 80.4% | 97.8% |
| 6t85A01 | 3.90.700.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0.52 | 40.0 | 2.96e-01 | 82.1% | 32.4% |
| 3iylW01 | 3.90.1810.10 | Alpha Beta › Alpha-Beta Complex › Reovirus components fold › Reovirus components | 0.51 | 40.0 | 2.55e-01 | 98.2% | 35.6% |
| 1t10A01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 44.0 | 2.68e-01 | 96.4% | 63.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3440985 | 365.1.1.0 ↗ | few secondary structure elements › Crambin-like › Crambin-like › Crambin-like | 0.78 | 42.0 | 5.47e-01 | 71.4% | 100.0% |
| 3431588 | 397.3.1.0 ↗ | few secondary structure elements › Toxic hairpin › Pollen allergen ole e 6 › Pollen allergen ole e 6 | 0.78 | 42.0 | 5.44e-01 | 71.4% | 100.0% |
| 4931472 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 50.0 | 3.42e-01 | 76.8% | 36.0% |
| 4028240 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 49.0 | 4.12e-01 | 82.1% | 46.3% |
| 3962550 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.66 | 56.0 | 3.89e-01 | 100.0% | 87.5% |
| 5041459 | 5067.1.1.12 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › UPF0014 | 0.66 | 57.0 | 3.90e-01 | 100.0% | 40.0% |
| 4964971 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 49.0 | 3.19e-01 | 82.1% | 32.6% |
| 3954971 | 5041.1.1.36 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › UPF0014 | 0.61 | 45.0 | 3.91e-01 | 80.4% | 86.7% |
| 3651470 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 46.0 | 3.53e-01 | 83.9% | 64.6% |
| 3701326 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.58 | 46.0 | 3.93e-01 | 89.3% | 90.5% |
| 3252021 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 48.0 | 4.22e-01 | 92.9% | 98.8% |
| 1612056 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.53 | 47.0 | 3.94e-01 | 98.2% | 62.0% |
| 5058002 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.53 | 45.0 | 3.43e-01 | 96.4% | 100.0% |
| 4885760 | 4019.1.1.5 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Glutaminase | 0.52 | 42.0 | 3.25e-01 | 94.6% | 87.1% |
| 3258496 | 108.1.1.26 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 | 0.51 | 38.0 | 3.58e-01 | 87.5% | 98.7% |
| 4937570 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 45.0 | 3.65e-01 | 100.0% | 70.5% |
| 4991298 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 44.0 | 3.91e-01 | 98.2% | 86.3% |