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IMGVR_UViG_2740891997_000001-2740891997-2741424530
Arc-VirIMGVR_UViG_2740891997_000001-2740891997-2741424530
Identity
- Kingdom:
- archaea
Quality
60.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-12_100-153
D2
medium
residues 13-99
Domain cluster:
rep: IMGVR_UViG_2528311097_000001-2528311097-2528599904__D25-69_84-106
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8bveA03 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.66 | 51.0 | 5.53e-01 | 87.4% | 100.0% |
| 1wu2A04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.63 | 51.0 | 5.38e-01 | 94.3% | 98.7% |
| 2kywA00 | 3.10.20.320 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) | 0.57 | 28.0 | 2.88e-01 | 97.7% | 43.7% |
| 3ttyA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 30.0 | 3.48e-01 | 94.3% | 83.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2526359 | 70.4.1.2 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr | 0.74 | 50.0 | 5.76e-01 | 95.4% | 100.0% |
| 2984229 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.69 | 57.0 | 6.00e-01 | 96.6% | 100.0% |
| 3169767 | 1.1.7.49 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ski7_2nd | 0.61 | 50.0 | 4.28e-01 | 98.9% | 55.0% |
| 3239806 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.60 | 51.0 | 5.17e-01 | 92.0% | 97.6% |
| 4983877 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.60 | 41.0 | 4.08e-01 | 97.7% | 68.9% |
| 4930314 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.59 | 39.0 | 4.03e-01 | 95.4% | 69.4% |
| 4984491 | 304.139.1.0 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related | 0.55 | 47.0 | 3.82e-01 | 97.7% | 77.7% |
| 4437930 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.50 | 38.0 | 2.82e-01 | 97.7% | 30.3% |