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IMGVR_UViG_2751185638_000006-2751185638-2752716892
Arc-VirIMGVR_UViG_2751185638_000006-2751185638-2752716892
Identity
- Kingdom:
- archaea
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 66-137
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r3pB00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.77 | 63.0 | 5.67e-01 | 97.2% | 65.3% |
| 3bm3A00 | 3.40.91.80 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.73 | 66.0 | 4.44e-01 | 100.0% | 31.3% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.70 | 55.0 | 5.12e-01 | 100.0% | 68.1% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.66 | 58.0 | 4.63e-01 | 100.0% | 53.4% |
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.65 | 55.0 | 4.72e-01 | 98.6% | 57.6% |
| 2a90A02 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.65 | 30.0 | 3.32e-01 | 94.4% | 52.5% |
| 2vldA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.63 | 52.0 | 4.61e-01 | 100.0% | 61.5% |
| 3k93A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.62 | 53.0 | 3.87e-01 | 100.0% | 60.5% |
| 3lm4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.62 | 42.0 | 3.47e-01 | 86.1% | 37.5% |
| 6tgvA01 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.59 | 52.0 | 3.92e-01 | 98.6% | 73.4% |
| 3itwA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.58 | 37.0 | 4.11e-01 | 84.7% | 83.9% |
| 2np2A00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.57 | 34.0 | 3.02e-01 | 81.9% | 41.2% |
| 8oosG01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 46.0 | 3.35e-01 | 98.6% | 73.2% |
| 1rzuB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 44.0 | 3.09e-01 | 100.0% | 72.1% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 2.96e-01 | 100.0% | 37.5% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3673147 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.92 | 83.0 | 6.91e-01 | 100.0% | 60.0% |
| 4027358 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.91 | 82.0 | 6.61e-01 | 100.0% | 55.2% |
| 3808239 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.90 | 78.0 | 6.87e-01 | 95.8% | 66.0% |
| 4026799 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.90 | 81.0 | 6.74e-01 | 100.0% | 60.0% |
| 4027449 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.88 | 79.0 | 6.87e-01 | 100.0% | 65.7% |
| 4027159 | 2008.1.1.86 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP | 0.86 | 81.0 | 6.75e-01 | 100.0% | 64.3% |
| 4029985 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.86 | 80.0 | 6.58e-01 | 98.6% | 71.4% |
| 4024506 | 109.4.1.315 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RAP | 0.84 | 78.0 | 4.69e-01 | 100.0% | 20.5% |
| 5038840 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.84 | 72.0 | 6.34e-01 | 100.0% | 66.0% |
| 4997775 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.83 | 69.0 | 5.88e-01 | 100.0% | 57.3% |
| 3281852 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.83 | 76.0 | 5.94e-01 | 100.0% | 62.8% |
| 4940296 | 2008.1.1.121 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MTES_1575 | 0.82 | 70.0 | 6.35e-01 | 97.2% | 69.5% |
| 3568683 | 2008.1.1.127 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FAST_2+RAP | 0.82 | 76.0 | 6.20e-01 | 100.0% | 73.6% |
| 4940595 | 2008.1.1.14 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr | 0.80 | 71.0 | 6.27e-01 | 100.0% | 69.0% |
| 3258001 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.79 | 68.0 | 5.39e-01 | 93.1% | 68.6% |
| 5027476 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.78 | 69.0 | 6.14e-01 | 100.0% | 69.0% |
| 4946865 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 65.0 | 5.61e-01 | 97.2% | 59.1% |
| 5028457 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 72.0 | 5.69e-01 | 100.0% | 55.7% |
| 4026721 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 68.0 | 6.05e-01 | 100.0% | 69.0% |
| 3163838 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.77 | 68.0 | 5.74e-01 | 100.0% | 60.0% |
| 3962618 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.77 | 70.0 | 5.86e-01 | 100.0% | 60.8% |
| 3963196 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.76 | 69.0 | 6.01e-01 | 100.0% | 68.5% |
| 3953988 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 69.0 | 6.08e-01 | 100.0% | 70.5% |
| 4984120 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.76 | 66.0 | 5.79e-01 | 95.8% | 71.4% |
| 3953141 | 2008.1.1.121 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MTES_1575 | 0.75 | 66.0 | 5.86e-01 | 98.6% | 69.5% |
| 3603694 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 68.0 | 5.54e-01 | 100.0% | 66.2% |
| 4029829 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.73 | 64.0 | 5.59e-01 | 100.0% | 64.5% |
| 4968758 | 2008.1.1.224 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_3 | 0.72 | 63.0 | 5.78e-01 | 100.0% | 73.7% |
| 4995722 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 62.0 | 5.59e-01 | 95.8% | 72.0% |
| 3509755 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 63.0 | 4.99e-01 | 100.0% | 49.3% |
| 2721398 | 2008.1.1.34 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc | 0.71 | 63.0 | 5.19e-01 | 100.0% | 62.0% |
| 3506045 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 62.0 | 4.60e-01 | 100.0% | 40.0% |
| 4402765 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 61.0 | 5.10e-01 | 100.0% | 58.1% |
| 4960251 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.69 | 60.0 | 4.99e-01 | 100.0% | 56.4% |
| 4983302 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 58.0 | 4.79e-01 | 100.0% | 53.6% |
| 5076295 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.67 | 58.0 | 4.79e-01 | 100.0% | 54.8% |
| 4240596 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.57 | 48.0 | 4.70e-01 | 100.0% | 91.3% |