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IMGVR_UViG_2756170196_000001-2756170196-2756476971
Arc-VirIMGVR_UViG_2756170196_000001-2756170196-2756476971
Identity
- Kingdom:
- archaea
Quality
79.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 92-107_352-368_395-452
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.54 | 28.0 | 3.74e-01 | 90.1% | 97.9% |
D2
medium
residues 146-197_219-351
Domain cluster:
rep: IMGVR_UViG_2642422540_000001-2642422540-2642604490__D95-272
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 40.0 | 4.98e-01 | 78.4% | 88.8% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 35.0 | 4.99e-01 | 88.6% | 100.0% |
| 2cfxA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.69 | 32.0 | 4.41e-01 | 93.0% | 87.8% |
| 1vmbA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.65 | 38.0 | 4.85e-01 | 91.9% | 99.1% |
| 3e3xA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 30.0 | 4.03e-01 | 85.9% | 93.6% |
| 8d8lF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 39.0 | 4.64e-01 | 92.4% | 99.2% |
| 1yrxC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 32.0 | 4.01e-01 | 75.1% | 94.2% |
| 4er8A00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.56 | 44.0 | 4.62e-01 | 98.9% | 89.7% |
| 4mt1A02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.56 | 31.0 | 4.07e-01 | 82.7% | 98.1% |
| 2jgbA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.54 | 30.0 | 3.08e-01 | 96.8% | 54.3% |
| 6ay1A00 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.54 | 39.0 | 4.47e-01 | 94.6% | 99.3% |
| 1ucnA00 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.53 | 40.0 | 4.35e-01 | 87.0% | 95.4% |
| 4zmuA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.52 | 33.0 | 3.60e-01 | 70.8% | 74.8% |
| 6zxbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.52 | 33.0 | 3.64e-01 | 70.3% | 80.6% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 31.0 | 3.46e-01 | 71.4% | 76.3% |
| 7e6gA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 32.0 | 3.53e-01 | 70.3% | 76.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3365659 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.66 | 34.0 | 4.64e-01 | 72.4% | 100.0% |
| 4478722 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.65 | 33.0 | 4.23e-01 | 92.4% | 83.8% |
| 4578112 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.65 | 31.0 | 4.34e-01 | 93.0% | 93.3% |
| 4268442 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.64 | 36.0 | 4.44e-01 | 93.5% | 87.8% |
| 3677764 | 304.8.1.23 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Helitron_like_N | 0.62 | 40.0 | 4.52e-01 | 98.4% | 85.0% |
| 3706885 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.58 | 30.0 | 3.93e-01 | 96.2% | 90.0% |
| 5037411 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.58 | 32.0 | 4.15e-01 | 82.7% | 99.0% |
| 3682007 | 304.8.1.64 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Helitron_like_N, REP_ORF2-G2P | 0.57 | 46.0 | 4.52e-01 | 88.1% | 78.4% |
| 4451470 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.56 | 29.0 | 3.38e-01 | 97.8% | 68.5% |
| 3982961 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.55 | 45.0 | 3.82e-01 | 86.5% | 71.1% |
| 5066082 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.55 | 45.0 | 4.01e-01 | 86.5% | 68.7% |
| 5078562 | 304.55.2.1 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › Y1_Tnp | 0.55 | 48.0 | 4.85e-01 | 100.0% | 94.1% |
| 3539033 | 304.34.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases › NDK | 0.53 | 36.0 | 4.22e-01 | 93.0% | 99.2% |
| 3368327 | 304.34.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases › NDK | 0.51 | 39.0 | 3.96e-01 | 87.0% | 78.9% |
| 3660259 | 304.6.1.5 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › Cytokin-bind | 0.51 | 39.0 | 3.37e-01 | 79.5% | 85.2% |
| 3255789 | 304.34.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases › NDK | 0.51 | 39.0 | 4.10e-01 | 86.5% | 88.5% |
| 3596967 | 304.46.1.0 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain | 0.51 | 39.0 | 4.19e-01 | 84.9% | 93.7% |
| 3273461 | 304.46.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF1-gamma domain › eEF1-gamma domain › EF1G | 0.50 | 41.0 | 4.38e-01 | 84.9% | 97.5% |
| 3918813 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 35.0 | 4.02e-01 | 87.6% | 97.8% |