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IMGVR_UViG_2778260947_000001-2778260947-2778386521
Arc-VirIMGVR_UViG_2778260947_000001-2778260947-2778386521
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-51
Domain cluster:
rep: IMGVR_UViG_2654588017_000001-2654588017-2656630112__D7-50
D2
high
residues 58-167
Domain cluster:
rep: IMGVR_UViG_3300015214_000248-3300015214-Ga0172382_100060011__D133-237
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 32.0 | 3.88e-01 | 79.1% | 86.4% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.58 | 44.0 | 4.04e-01 | 81.8% | 86.5% |
| 2xf1A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 43.0 | 4.21e-01 | 84.5% | 94.3% |
| 4py9A02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.54 | 32.0 | 3.13e-01 | 80.9% | 50.8% |
| 6djwA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 31.0 | 3.69e-01 | 80.9% | 86.1% |
| 1cfyA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 40.0 | 3.81e-01 | 80.9% | 87.2% |
| 1bdgA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.53 | 45.0 | 3.40e-01 | 94.5% | 92.1% |
| 2ijeS00 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.51 | 37.0 | 2.96e-01 | 84.5% | 36.3% |
| 3hi0A03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.50 | 44.0 | 3.67e-01 | 99.1% | 66.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942252 | 3261.1.1.8 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › DUF2612 | 0.75 | 66.0 | 6.70e-01 | 100.0% | 95.5% |
| 3986979 | 1049.2.1.2 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Phage_Wedge1 | 0.72 | 66.0 | 5.84e-01 | 100.0% | 70.8% |
| 5003241 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.68 | 61.0 | 6.09e-01 | 100.0% | 95.7% |
| 3685815 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.62 | 44.0 | 4.12e-01 | 72.7% | 62.2% |
| 4340675 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.58 | 44.0 | 4.70e-01 | 82.7% | 97.8% |
| 5028435 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.56 | 45.0 | 3.45e-01 | 87.3% | 73.8% |
| 4033357 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.56 | 33.0 | 3.30e-01 | 83.6% | 53.4% |
| 5044279 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.55 | 32.0 | 3.01e-01 | 83.6% | 45.1% |
| 4970990 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.55 | 48.0 | 3.33e-01 | 97.3% | 97.4% |
| 4932484 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.55 | 38.0 | 3.95e-01 | 70.9% | 90.0% |
| 3838476 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.55 | 40.0 | 4.42e-01 | 77.3% | 100.0% |
| 4938434 | 131.1.1.14 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Cas3_HD | 0.53 | 40.0 | 3.24e-01 | 82.7% | 83.4% |
| 4377027 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.53 | 45.0 | 3.85e-01 | 97.3% | 96.8% |
| 5071566 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.52 | 44.0 | 4.05e-01 | 90.9% | 97.9% |
| 4618209 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 46.0 | 3.40e-01 | 96.4% | 76.4% |
| 3574221 | 186.2.1.1 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box | 0.51 | 38.0 | 3.70e-01 | 98.2% | 70.0% |