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IMGVR_UViG_2778261548_000001-2778261548-2780537384
Arc-VirIMGVR_UViG_2778261548_000001-2778261548-2780537384
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 82-138
Domain cluster:
rep: MK493321.1__QBQ74924.1__RW110999_046__00039__D81-135
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nkdA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.57 | 43.0 | 3.82e-01 | 82.5% | 70.2% |
| 2imgA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 39.0 | 3.00e-01 | 86.0% | 29.5% |
| 3twoA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.30e-01 | 100.0% | 67.3% |
D2
medium
residues 8-80
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.56 | 47.0 | 2.81e-01 | 94.5% | 17.3% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 41.0 | 3.60e-01 | 80.8% | 58.8% |
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.52 | 42.0 | 3.37e-01 | 89.0% | 79.6% |
| 1edzA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.50e-01 | 97.3% | 58.3% |
| 6mzoA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 39.0 | 3.31e-01 | 83.6% | 54.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.73 | 44.0 | 5.41e-01 | 79.5% | 100.0% |
| 3509348 | 214.1.1.15 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063, DUF7145 | 0.64 | 47.0 | 3.13e-01 | 78.1% | 34.7% |
| 3516794 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.60 | 45.0 | 3.71e-01 | 82.2% | 55.0% |
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.57 | 52.0 | 3.14e-01 | 98.6% | 24.4% |
| 3517867 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.56 | 41.0 | 3.53e-01 | 80.8% | 60.0% |
| 4627221 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.55 | 32.0 | 3.40e-01 | 91.8% | 64.6% |
| 4680376 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.55 | 31.0 | 3.44e-01 | 91.8% | 70.9% |
| 3906671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 30.0 | 3.76e-01 | 89.0% | 97.5% |
| 3190369 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.53 | 36.0 | 3.26e-01 | 71.2% | 86.7% |
| 3633382 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.50 | 37.0 | 2.97e-01 | 79.5% | 74.8% |