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IMGVR_UViG_2785511040_000001-2785511040-2786107792
Arc-VirIMGVR_UViG_2785511040_000001-2785511040-2786107792
Identity
- Kingdom:
- archaea
Quality
83.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-45
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5k2mA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.79 | 61.0 | 4.72e-01 | 100.0% | 38.5% |
| 3vpbA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.78 | 64.0 | 4.83e-01 | 100.0% | 38.6% |
| 1z0sA01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.75 | 68.0 | 4.75e-01 | 100.0% | 47.6% |
| 4wxmB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 64.0 | 4.56e-01 | 100.0% | 54.3% |
| 2r0cA03 | 3.40.30.120 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.74 | 60.0 | 4.39e-01 | 92.9% | 34.5% |
| 3agkA03 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.74 | 56.0 | 4.40e-01 | 95.2% | 38.7% |
| 3l6uA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 62.0 | 4.48e-01 | 100.0% | 57.1% |
| 3eeqA01 | 3.40.50.11220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.73 | 62.0 | 4.54e-01 | 100.0% | 54.2% |
| 4n5hX00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.71 | 60.0 | 3.62e-01 | 100.0% | 33.0% |
| 1q35A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.71 | 57.0 | 4.06e-01 | 100.0% | 30.1% |
| 6k34A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.70 | 55.0 | 3.32e-01 | 92.9% | 19.9% |
| 3hbaA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.69 | 57.0 | 3.79e-01 | 100.0% | 38.2% |
| 6nkoC00 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.69 | 55.0 | 3.64e-01 | 92.9% | 63.2% |
| 6o9aA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.68 | 56.0 | 4.16e-01 | 95.2% | 38.9% |
| 2zshA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.67 | 55.0 | 3.30e-01 | 100.0% | 28.4% |
| 2amlA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.67 | 56.0 | 3.94e-01 | 100.0% | 49.7% |
| 3c3jA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.66 | 53.0 | 3.58e-01 | 100.0% | 44.8% |
| 2hyiC02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 52.0 | 3.65e-01 | 100.0% | 97.0% |
| 1nm3A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.65 | 52.0 | 4.50e-01 | 92.9% | 61.4% |
| 4zylB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 51.0 | 3.74e-01 | 100.0% | 58.3% |
| 3r3pB00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.65 | 50.0 | 3.99e-01 | 90.5% | 45.9% |
| 3ffrA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.65 | 53.0 | 3.36e-01 | 100.0% | 30.0% |
| 3fxaA00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.64 | 52.0 | 3.49e-01 | 100.0% | 37.2% |
| 4jedA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 51.0 | 4.00e-01 | 92.9% | 43.9% |
| 4z9nA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 51.0 | 4.01e-01 | 97.6% | 44.7% |
| 4hz2A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 53.0 | 4.31e-01 | 92.9% | 53.1% |
| 3bl4A02 | 3.40.970.30 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › yp_829618.1 like domains | 0.63 | 49.0 | 4.81e-01 | 92.9% | 85.4% |
| 1z9hA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 50.0 | 4.20e-01 | 92.9% | 52.5% |
| 1zczA01 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.62 | 51.0 | 3.57e-01 | 100.0% | 64.7% |
| 4f2gA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.62 | 51.0 | 3.66e-01 | 100.0% | 60.6% |
| 3qh4A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 50.0 | 3.09e-01 | 100.0% | 19.1% |
| 2fnoA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 51.0 | 4.04e-01 | 95.2% | 44.7% |
| 2jxpA01 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.62 | 51.0 | 3.54e-01 | 92.9% | 54.6% |
| 4rgyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 50.0 | 3.23e-01 | 100.0% | 21.9% |
| 2qsxA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 47.0 | 3.79e-01 | 92.9% | 44.7% |
| 2qpqA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 46.0 | 3.44e-01 | 92.9% | 42.7% |
| 2b4lA01 | 3.40.190.100 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Glycine betaine-binding periplasmic protein; domain 2 | 0.58 | 45.0 | 3.57e-01 | 100.0% | 42.3% |
| 2dvzA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 44.0 | 3.32e-01 | 92.9% | 39.5% |
| 3qavA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 45.0 | 3.85e-01 | 92.9% | 58.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3825798 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.78 | 66.0 | 4.90e-01 | 97.6% | 38.1% |
| 4333564 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.78 | 66.0 | 5.06e-01 | 97.6% | 42.1% |
| 3966175 | 2007.1.3.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › FleQ | 0.77 | 68.0 | 4.66e-01 | 100.0% | 50.0% |
| 3287543 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.76 | 66.0 | 5.07e-01 | 100.0% | 78.9% |
| 4940568 | 2007.1.1.16 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase_5 | 0.75 | 64.0 | 3.93e-01 | 100.0% | 29.1% |
| 4940029 | 2007.1.16.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › DUF1847 | 0.75 | 65.0 | 4.27e-01 | 100.0% | 50.9% |
| 3230838 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.73 | 57.0 | 3.89e-01 | 97.6% | 23.6% |
| 3237561 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.72 | 58.0 | 3.93e-01 | 97.6% | 23.5% |
| 3602813 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.72 | 63.0 | 5.04e-01 | 100.0% | 90.6% |
| 4933349 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.71 | 62.0 | 5.04e-01 | 100.0% | 66.3% |
| 3933775 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.69 | 55.0 | 3.85e-01 | 97.6% | 26.2% |
| None | — | 0.68 | 48.0 | 5.13e-01 | 76.2% | 97.0% | |
| 3249638 | 7543.1.1.1 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › AICARFT_IMPCHas,MGS | 0.68 | 55.0 | 3.47e-01 | 92.9% | 56.0% |
| 4940439 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.68 | 54.0 | 3.51e-01 | 92.9% | 61.5% |
| 1289554 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.67 | 55.0 | 3.75e-01 | 100.0% | 40.8% |
| 5002149 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.67 | 54.0 | 3.51e-01 | 92.9% | 63.0% |
| 1202137 | 7543.1.1.1 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › AICARFT_IMPCHas,MGS | 0.65 | 55.0 | 3.51e-01 | 100.0% | 59.4% |
| 11313 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.62 | 51.0 | 4.13e-01 | 95.2% | 48.3% |
| 5052548 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.54 | 43.0 | 3.15e-01 | 100.0% | 55.9% |