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IMGVR_UViG_2788499920_000001-2788499920-2788989478
Arc-VirIMGVR_UViG_2788499920_000001-2788499920-2788989478
Identity
- Kingdom:
- archaea
Quality
79.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-65
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.63 | 42.0 | 3.55e-01 | 92.1% | 40.4% |
| 5swvC02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.60 | 53.0 | 4.19e-01 | 100.0% | 87.5% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 49.0 | 4.27e-01 | 88.9% | 92.6% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 50.0 | 4.07e-01 | 93.7% | 78.9% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.59 | 41.0 | 4.27e-01 | 93.7% | 80.7% |
| 5e3iA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.58 | 46.0 | 4.01e-01 | 88.9% | 90.9% |
| 1atiB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.57 | 48.0 | 4.04e-01 | 95.2% | 91.1% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.56 | 36.0 | 3.96e-01 | 79.4% | 91.3% |
| 1x9mA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 44.0 | 3.01e-01 | 90.5% | 36.7% |
| 6aqgD02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 38.0 | 2.41e-01 | 74.6% | 84.8% |
| 6p4wB01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.53 | 42.0 | 3.63e-01 | 92.1% | 93.6% |
| 3draB00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 37.0 | 2.40e-01 | 77.8% | 22.0% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 4.14e-01 | 100.0% | 98.0% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 36.0 | 3.78e-01 | 74.6% | 82.5% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3733166 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.75 | 58.0 | 6.10e-01 | 82.5% | 96.4% |
| 3739867 | 2.1.1.344 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Vfa1 | 0.73 | 52.0 | 4.99e-01 | 76.2% | 69.9% |
| 3189999 | 376.1.2.44 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › Vfa1 | 0.71 | 53.0 | 5.81e-01 | 84.1% | 100.0% |
| 4943586 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.67 | 40.0 | 3.65e-01 | 76.2% | 46.3% |
| 4030389 | 376.1.2.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_4 | 0.66 | 52.0 | 4.58e-01 | 87.3% | 81.1% |
| 3587295 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.65 | 54.0 | 5.42e-01 | 93.7% | 100.0% |
| 3580663 | 3991.1.1.2 ↗ | alpha bundles › Rabin8 C-terminal domain › Rabin8 C-terminal domain › Rabin8 C-terminal domain › RAB3A-like_C | 0.65 | 55.0 | 3.99e-01 | 93.7% | 34.9% |
| 3625637 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.65 | 48.0 | 5.20e-01 | 81.0% | 100.0% |
| 3881917 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.65 | 53.0 | 4.69e-01 | 92.1% | 63.2% |
| 4014164 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.65 | 48.0 | 4.82e-01 | 81.0% | 80.0% |
| 3808167 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.64 | 42.0 | 4.56e-01 | 71.4% | 86.0% |
| 3845514 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.64 | 52.0 | 5.36e-01 | 92.1% | 100.0% |
| 3238073 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.62 | 48.0 | 4.92e-01 | 87.3% | 93.3% |
| 3491043 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.61 | 46.0 | 4.00e-01 | 84.1% | 66.7% |
| 4930686 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 43.0 | 3.18e-01 | 73.0% | 29.4% |
| 3243705 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.60 | 42.0 | 4.58e-01 | 87.3% | 94.0% |
| 5065022 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.60 | 52.0 | 3.62e-01 | 98.4% | 60.9% |
| 5001220 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.60 | 50.0 | 4.02e-01 | 93.7% | 77.6% |
| 3893533 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.59 | 52.0 | 4.48e-01 | 100.0% | 91.0% |
| 3817936 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.59 | 43.0 | 4.73e-01 | 81.0% | 100.0% |
| 5025933 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 45.0 | 3.98e-01 | 84.1% | 82.1% |
| 3460948 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.58 | 44.0 | 3.99e-01 | 85.7% | 83.3% |
| 3988064 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 42.0 | 4.04e-01 | 76.2% | 70.0% |
| 3815263 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.58 | 37.0 | 4.10e-01 | 71.4% | 93.3% |
| 3451565 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.57 | 49.0 | 3.83e-01 | 100.0% | 52.1% |
| 3346269 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.55 | 43.0 | 3.98e-01 | 93.7% | 98.9% |
| 5058926 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.53 | 43.0 | 4.09e-01 | 90.5% | 90.7% |
| 2455432 | 2484.1.1.68 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 | 0.53 | 42.0 | 2.97e-01 | 88.9% | 39.9% |
| 3834189 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.53 | 40.0 | 3.34e-01 | 98.4% | 43.1% |
| 3887981 | 377.1.1.28 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Pcf11_C | 0.53 | 36.0 | 3.74e-01 | 73.0% | 96.7% |
| 3441723 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.52 | 46.0 | 2.99e-01 | 100.0% | 39.9% |
| 5032233 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.36e-01 | 88.9% | 72.2% |
| 4823230 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.51 | 42.0 | 3.90e-01 | 92.1% | 71.6% |