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IMGVR_UViG_2791355014_000001-2791355014-2792331255

Arc-Vir

IMGVR_UViG_2791355014_000001-2791355014-2792331255

Identity

Kingdom:
archaea

Quality

95.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-106
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04266.21 best ASCH 30.2 8.60e-07 100.0% 91.3%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s9xA00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.86 82.0 6.87e-01 100.0% 71.1%
1t62B00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.85 80.0 6.68e-01 100.0% 67.5%
2kkuA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.74 68.0 6.06e-01 100.0% 76.3%
1s04A00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.73 66.0 6.47e-01 100.0% 91.8%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 36.0 4.31e-01 83.3% 73.6%
5i7pA02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 33.0 4.62e-01 91.2% 100.0%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.59 41.0 4.10e-01 100.0% 69.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 32.0 3.74e-01 84.3% 75.0%
3ammA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.57 42.0 3.15e-01 76.5% 83.1%
3go5A04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 33.0 4.02e-01 94.1% 93.7%
2wbfX00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 49.0 3.69e-01 100.0% 92.5%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.55 38.0 3.24e-01 100.0% 44.0%
2kw8A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.53 48.0 4.17e-01 100.0% 79.1%
1orfA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 39.0 3.92e-01 100.0% 79.0%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4972120 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.93 83.0 8.10e-01 100.0% 86.4%
5077279 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.92 82.0 7.65e-01 100.0% 78.3%
5070577 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.91 85.0 8.28e-01 100.0% 90.0%
4982523 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.91 81.0 7.78e-01 100.0% 82.6%
4995779 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.91 87.0 7.50e-01 100.0% 93.9%
4972117 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.89 81.0 7.64e-01 100.0% 81.7%
5022429 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.89 79.0 7.35e-01 100.0% 76.8%
5042221 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.89 79.0 7.83e-01 100.0% 90.5%
4954540 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.89 79.0 7.73e-01 100.0% 87.3%
4019865 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.88 84.0 7.27e-01 100.0% 73.1%
5006048 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.87 73.0 7.16e-01 100.0% 81.8%
4608277 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.87 82.0 7.50e-01 100.0% 87.7%
3279326 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.86 70.0 7.45e-01 100.0% 95.6%
144031 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.86 82.0 6.87e-01 100.0% 71.1%
4958692 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.86 81.0 6.98e-01 100.0% 76.7%
4998591 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.86 80.0 7.01e-01 100.0% 79.3%
4990496 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.85 74.0 7.13e-01 100.0% 81.7%
5078127 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.85 66.0 7.21e-01 91.2% 97.6%
4155252 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.83 72.0 7.14e-01 100.0% 89.5%
177 1.1.9.35 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.81 76.0 6.51e-01 100.0% 70.6%
2105336 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.81 68.0 5.92e-01 100.0% 61.1%
3165125 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.80 70.0 6.93e-01 100.0% 89.5%
3653680 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.80 74.0 5.85e-01 100.0% 52.1%
4995643 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.80 68.0 6.01e-01 100.0% 63.4%
5016521 1.1.9.7 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.80 69.0 6.18e-01 100.0% 68.1%
3817355 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.80 73.0 6.70e-01 100.0% 76.2%
4953076 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.80 73.0 6.95e-01 100.0% 86.7%
5079450 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.79 67.0 5.95e-01 100.0% 65.0%
4122172 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.79 66.0 6.18e-01 100.0% 73.4%
4229723 1.1.9.7 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.78 66.0 5.72e-01 100.0% 60.7%
3944719 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 73.0 6.48e-01 100.0% 74.1%
4970789 1.1.9.7 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.77 69.0 6.11e-01 100.0% 70.0%
5023730 1.1.9.9 beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.76 66.0 5.79e-01 100.0% 64.8%
3603398 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 69.0 6.76e-01 100.0% 96.3%
4957730 1.1.9.3 beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE 0.75 59.0 5.31e-01 100.0% 61.4%
5024536 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 66.0 5.91e-01 100.0% 71.7%
4950776 1.1.9.7 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.72 66.0 5.93e-01 100.0% 77.9%
5016524 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.70 56.0 4.97e-01 100.0% 60.7%
4967879 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.64 51.0 5.27e-01 100.0% 89.5%
3347795 4.1.1.94 beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.59 32.0 3.55e-01 83.3% 66.3%
3237640 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.59 30.0 2.97e-01 82.4% 44.5%
4448334 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.59 36.0 4.47e-01 88.2% 96.9%
5003338 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 42.0 4.17e-01 98.0% 71.4%
3575776 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 26.0 3.60e-01 77.5% 88.0%
1144815 4.1.1.103 beta barrels › SH3 › SH3 › SH3 › SH3_12 0.56 32.0 3.62e-01 83.3% 72.5%
4855772 219.1.1.1 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.55 41.0 3.65e-01 79.4% 94.1%
3218545 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.55 34.0 3.74e-01 80.4% 75.3%
3597575 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 3.81e-01 83.3% 69.3%
3399872 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.54 48.0 3.89e-01 100.0% 83.5%
5044755 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.53 44.0 4.10e-01 98.0% 72.0%
5028172 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 42.0 3.98e-01 98.0% 71.7%
5047619 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 44.0 4.01e-01 98.0% 69.2%
3303205 101.15.1.1 alpha arrays › HTH › LysM domain › LysM domain › LysM 0.52 29.0 3.51e-01 95.1% 88.3%
5011628 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 43.0 3.97e-01 99.0% 70.0%
4943986 1.1.7.140 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 0.51 43.0 4.00e-01 98.0% 73.6%
D2 high residues 114-166
PDB
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 59.0 5.92e-01 100.0% 98.1%
7r3mA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.06e-01 100.0% 69.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 53.0 5.59e-01 96.2% 100.0%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 58.0 5.43e-01 100.0% 96.9%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 57.0 5.14e-01 100.0% 82.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 58.0 5.37e-01 100.0% 86.6%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 56.0 5.42e-01 100.0% 93.2%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 44.0 4.38e-01 75.5% 88.9%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.65e-01 100.0% 76.7%
4b9wA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 45.0 3.64e-01 81.1% 75.9%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 49.0 4.76e-01 100.0% 87.1%
2k5qA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.58 41.0 3.44e-01 79.2% 71.4%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 3.56e-01 100.0% 38.4%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.57 46.0 3.83e-01 100.0% 78.7%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.20e-01 100.0% 80.8%
4hc5D00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 41.0 3.19e-01 90.6% 76.3%
2i7rA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 41.0 3.28e-01 90.6% 80.7%
2jozA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 37.0 3.18e-01 83.0% 93.8%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4053957 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.80 59.0 6.09e-01 100.0% 84.0%
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 59.0 5.33e-01 100.0% 62.9%
3838381 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.76 50.0 2.99e-01 100.0% 10.5%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 62.0 4.42e-01 100.0% 31.0%
5058103 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 62.0 5.74e-01 100.0% 72.1%
4941620 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 62.0 5.95e-01 100.0% 81.7%
4627221 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.74 53.0 4.99e-01 100.0% 63.1%
4484893 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.73e-01 100.0% 75.4%
4116754 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.73 53.0 5.65e-01 100.0% 91.1%
3374228 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 63.0 6.04e-01 100.0% 91.7%
4105348 4.1.1.394 beta barrels › SH3 › SH3 › SH3 › SlpA 0.69 59.0 5.63e-01 98.1% 98.4%
4091379 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.59e-01 100.0% 78.6%
3483375 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 61.0 5.40e-01 100.0% 84.0%
3656401 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.02e-01 100.0% 66.7%
3323530 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.67 60.0 5.61e-01 100.0% 84.6%
3928985 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 57.0 4.84e-01 100.0% 65.6%
5074039 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.12e-01 100.0% 76.0%
3801719 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 58.0 5.26e-01 100.0% 78.6%
3923813 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 58.0 5.43e-01 100.0% 86.2%
3623786 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 57.0 5.33e-01 100.0% 81.5%
3388887 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.64 50.0 4.73e-01 88.7% 76.9%
3550579 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 56.0 5.61e-01 100.0% 96.4%
3259044 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 56.0 5.60e-01 100.0% 96.4%
3998645 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 56.0 5.28e-01 100.0% 81.5%
3523046 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 56.0 4.77e-01 100.0% 62.4%
5064571 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 55.0 4.60e-01 100.0% 63.3%
4800750 4.1.1.107 beta barrels › SH3 › SH3 › SH3 › XRN1_D1 0.62 53.0 3.65e-01 100.0% 56.8%
3885695 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 54.0 4.71e-01 100.0% 67.5%
3679595 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.58 48.0 4.40e-01 100.0% 75.7%
3678872 4.1.1.239 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.57 48.0 4.36e-01 100.0% 86.7%
3591144 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 47.0 3.55e-01 100.0% 36.7%
3176333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 43.0 4.21e-01 100.0% 76.9%
4238585 375.1.4.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C 0.53 42.0 4.23e-01 100.0% 96.3%
4278911 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.51 39.0 3.98e-01 100.0% 94.0%