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IMGVR_UViG_2791355014_000001-2791355014-2792331269
Arc-VirIMGVR_UViG_2791355014_000001-2791355014-2792331269
Identity
- Kingdom:
- archaea
Quality
77.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-76
Domain cluster:
rep: IMGVR_UViG_2684622743_000001-2684622743-2685523756__D7-65
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 48.0 | 5.45e-01 | 82.9% | 91.1% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 47.0 | 4.94e-01 | 73.7% | 76.1% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 44.0 | 4.69e-01 | 73.7% | 72.7% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 50.0 | 5.41e-01 | 81.6% | 93.4% |
| 2kz6A01 | 6.10.140.1310 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 41.0 | 4.03e-01 | 92.1% | 55.6% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 4.97e-01 | 75.0% | 98.6% |
| 1lvaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 5.22e-01 | 73.7% | 96.8% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 5.26e-01 | 75.0% | 98.4% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 5.26e-01 | 76.3% | 100.0% |
| 1u2wD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 44.0 | 4.15e-01 | 80.3% | 55.3% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 48.0 | 4.99e-01 | 77.6% | 97.2% |
| 6az1a00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 5.42e-01 | 88.2% | 100.0% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 3.91e-01 | 78.9% | 44.2% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 3.99e-01 | 78.9% | 48.8% |
| 3b02A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 45.0 | 4.40e-01 | 75.0% | 83.5% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 36.0 | 3.30e-01 | 92.1% | 41.7% |
| 1ft9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 45.0 | 4.51e-01 | 76.3% | 91.1% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 47.0 | 3.89e-01 | 78.9% | 46.9% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 46.0 | 3.77e-01 | 78.9% | 48.9% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.60e-01 | 80.3% | 90.1% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 46.0 | 3.78e-01 | 78.9% | 46.4% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 46.0 | 4.25e-01 | 80.3% | 69.3% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 46.0 | 3.80e-01 | 78.9% | 47.0% |
| 7cluA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 4.33e-01 | 81.6% | 66.3% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 46.0 | 4.39e-01 | 78.9% | 76.4% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 45.0 | 4.48e-01 | 76.3% | 78.2% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 50.0 | 3.77e-01 | 90.8% | 86.9% |
| 2h6bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 44.0 | 4.11e-01 | 76.3% | 76.0% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 4.65e-01 | 81.6% | 89.7% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 4.29e-01 | 81.6% | 80.9% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 4.24e-01 | 75.0% | 82.5% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 4.15e-01 | 75.0% | 82.1% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 4.33e-01 | 82.9% | 68.9% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.30e-01 | 78.9% | 75.3% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 41.0 | 3.84e-01 | 75.0% | 57.4% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.38e-01 | 78.9% | 88.7% |
| 2nriB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 4.14e-01 | 78.9% | 71.7% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 43.0 | 3.57e-01 | 76.3% | 48.5% |
| 2ao9I01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 43.0 | 4.18e-01 | 88.2% | 67.8% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 42.0 | 3.85e-01 | 84.2% | 55.7% |
| 1o3sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 43.0 | 4.46e-01 | 78.9% | 100.0% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 4.19e-01 | 78.9% | 86.4% |
| 3eetA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 40.0 | 4.31e-01 | 75.0% | 96.9% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 47.0 | 3.42e-01 | 92.1% | 66.2% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.52e-01 | 75.0% | 59.6% |
| 3gziA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 45.0 | 3.39e-01 | 93.4% | 78.8% |
| 2e1qC05 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.54 | 45.0 | 3.93e-01 | 92.1% | 60.2% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 43.0 | 3.23e-01 | 88.2% | 63.2% |
| 4ed9A01 | 3.40.50.10540 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 | 0.53 | 39.0 | 2.63e-01 | 76.3% | 33.2% |
| 1ikpA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.52 | 42.0 | 3.41e-01 | 92.1% | 45.6% |
| 1di1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.50 | 40.0 | 2.73e-01 | 88.2% | 35.9% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4926894 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.75 | 48.0 | 5.37e-01 | 77.6% | 83.3% |
| 5027754 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 44.0 | 5.32e-01 | 71.1% | 100.0% |
| 4061597 | 101.1.6.1 ↗ | alpha arrays › HTH › HTH › TrpR › Trp_repressor | 0.68 | 45.0 | 4.35e-01 | 77.6% | 60.0% |
| 3942897 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 47.0 | 4.68e-01 | 72.4% | 83.7% |
| 5052425 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 48.0 | 4.51e-01 | 73.7% | 68.9% |
| 5019185 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.67 | 48.0 | 4.45e-01 | 76.3% | 76.5% |
| 4017767 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 50.0 | 4.61e-01 | 81.6% | 66.0% |
| 3285621 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.65 | 48.0 | 4.77e-01 | 78.9% | 90.0% |
| 3291724 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.64 | 48.0 | 4.57e-01 | 80.3% | 90.0% |
| 3491271 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.63 | 45.0 | 4.38e-01 | 75.0% | 74.1% |
| 5052426 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.63 | 47.0 | 3.88e-01 | 78.9% | 50.4% |
| 5017698 | 101.1.1.187 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 | 0.62 | 45.0 | 4.76e-01 | 76.3% | 95.4% |
| 3282419 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.62 | 46.0 | 4.02e-01 | 78.9% | 86.1% |
| 3182450 | 101.1.2.493 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26557 | 0.62 | 46.0 | 4.11e-01 | 80.3% | 70.9% |
| 5003296 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.62 | 51.0 | 4.47e-01 | 89.5% | 85.5% |
| 2550 | 101.1.1.59 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1_2 | 0.61 | 51.0 | 4.41e-01 | 90.8% | 59.8% |
| 4084282 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.60 | 43.0 | 4.18e-01 | 78.9% | 67.1% |
| None | — | 0.60 | 42.0 | 4.23e-01 | 73.7% | 84.4% | |
| 5031443 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 46.0 | 4.74e-01 | 82.9% | 97.1% |
| 3979886 | 3759.1.1.2 ↗ | alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Phage_antiter_Q | 0.60 | 48.0 | 3.90e-01 | 90.8% | 45.2% |
| 3185992 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.59 | 42.0 | 3.55e-01 | 76.3% | 44.4% |
| 5038656 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.59 | 44.0 | 4.36e-01 | 80.3% | 81.2% |
| 4019411 | 101.21.1.0 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit | 0.59 | 46.0 | 4.68e-01 | 86.8% | 94.7% |
| 4979101 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 45.0 | 4.73e-01 | 88.2% | 95.6% |
| 3286793 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.59 | 45.0 | 3.76e-01 | 84.2% | 63.6% |
| 3414098 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 44.0 | 4.29e-01 | 81.6% | 78.8% |
| 3477992 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 45.0 | 4.52e-01 | 85.5% | 100.0% |
| 5036215 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 40.0 | 3.52e-01 | 71.1% | 49.1% |
| 5043806 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 44.0 | 4.20e-01 | 82.9% | 74.4% |
| 5032275 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.58 | 43.0 | 3.95e-01 | 80.3% | 72.0% |
| 5033203 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 44.0 | 4.51e-01 | 84.2% | 100.0% |
| 4976469 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.57 | 49.0 | 3.35e-01 | 98.7% | 92.2% |
| 5053790 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.56 | 42.0 | 3.93e-01 | 80.3% | 74.7% |
| 3775826 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.56 | 36.0 | 2.92e-01 | 71.1% | 33.8% |
| 3433370 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.55 | 39.0 | 3.73e-01 | 80.3% | 61.7% |
| 134552 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.55 | 41.0 | 4.07e-01 | 81.6% | 76.8% |
| 3915673 | 109.4.1.2898 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd1, PF26777, PF26778 | 0.54 | 47.0 | 2.64e-01 | 100.0% | 52.2% |
| 5052967 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 46.0 | 3.47e-01 | 94.7% | 96.8% |
| 3593393 | 5073.1.1.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M | 0.53 | 44.0 | 2.82e-01 | 94.7% | 46.0% |
| 4951802 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.53 | 42.0 | 3.32e-01 | 92.1% | 65.6% |
| 3226384 | 101.1.1.264 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SPK | 0.53 | 40.0 | 3.84e-01 | 86.8% | 94.7% |
| 4142133 | 133.1.1.7 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › PF28625 | 0.52 | 43.0 | 3.49e-01 | 97.4% | 98.8% |
| 3948271 | 2485.1.1.41 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 | 0.52 | 40.0 | 3.08e-01 | 88.2% | 80.5% |
| 3884724 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 43.0 | 3.30e-01 | 100.0% | 52.8% |
| 3622196 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.50 | 43.0 | 3.80e-01 | 100.0% | 100.0% |
| 3673003 | 3922.1.1.254 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › NET2A_C | 0.50 | 42.0 | 3.71e-01 | 100.0% | 94.4% |
D2
medium
residues 77-155
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 62.0 | 5.83e-01 | 89.9% | 66.3% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 62.0 | 6.36e-01 | 100.0% | 80.5% |
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.81 | 65.0 | 5.12e-01 | 94.9% | 43.7% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.81 | 57.0 | 5.85e-01 | 92.4% | 77.3% |
| 1nu7D01 | 1.20.120.750 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1 | 0.80 | 50.0 | 4.16e-01 | 89.9% | 37.8% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 69.0 | 5.45e-01 | 94.9% | 64.9% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 61.0 | 6.22e-01 | 84.8% | 93.5% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 65.0 | 5.79e-01 | 93.7% | 75.2% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.73 | 61.0 | 5.33e-01 | 100.0% | 62.7% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.73 | 56.0 | 5.57e-01 | 79.7% | 86.3% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 68.0 | 5.78e-01 | 100.0% | 78.2% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.72 | 62.0 | 4.04e-01 | 93.7% | 49.7% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 61.0 | 5.53e-01 | 92.4% | 76.7% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.71 | 50.0 | 5.40e-01 | 96.2% | 88.1% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 63.0 | 4.31e-01 | 100.0% | 65.8% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 57.0 | 5.64e-01 | 98.7% | 85.5% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 52.0 | 5.11e-01 | 93.7% | 75.0% |
| 3cqcA00 | 1.20.190.50 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.65 | 54.0 | 3.83e-01 | 93.7% | 29.1% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 52.0 | 5.39e-01 | 87.3% | 93.1% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.64 | 52.0 | 5.17e-01 | 88.6% | 84.1% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.64 | 34.0 | 4.05e-01 | 72.2% | 75.4% |
| 3ejnA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 48.0 | 3.53e-01 | 81.0% | 32.0% |
| 1d8cA03 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.63 | 47.0 | 3.92e-01 | 79.7% | 46.7% |
| 1kutB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 31.0 | 3.02e-01 | 82.3% | 41.6% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.59 | 46.0 | 4.49e-01 | 84.8% | 77.6% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 44.0 | 4.01e-01 | 82.3% | 60.7% |
| 1hywA00 | 3.30.1580.10 | Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W | 0.57 | 40.0 | 4.52e-01 | 73.4% | 98.3% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.54 | 39.0 | 3.70e-01 | 77.2% | 68.4% |
| 4y97D00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.53 | 46.0 | 3.61e-01 | 100.0% | 45.5% |
| 6kjcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 45.0 | 2.86e-01 | 98.7% | 91.5% |
| 1g0hA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.51 | 38.0 | 3.23e-01 | 81.0% | 99.3% |
| 3q23A02 | 3.30.70.2440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 37.0 | 2.98e-01 | 86.1% | 40.9% |
| 3ungC03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 38.0 | 3.25e-01 | 96.2% | 48.9% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3244401 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.81 | 71.0 | 6.18e-01 | 93.7% | 83.5% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.79 | 70.0 | 6.06e-01 | 93.7% | 73.9% |
| 5002054 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.79 | 74.0 | 5.82e-01 | 100.0% | 73.3% |
| 3497934 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.79 | 69.0 | 4.72e-01 | 93.7% | 32.8% |
| 4029803 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.78 | 69.0 | 5.76e-01 | 94.9% | 77.7% |
| 5062471 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.78 | 68.0 | 6.01e-01 | 93.7% | 76.4% |
| 4008202 | 192.8.1.60 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF2542 | 0.77 | 59.0 | 5.95e-01 | 79.7% | 100.0% |
| 4023774 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.77 | 67.0 | 4.55e-01 | 93.7% | 29.2% |
| 4152656 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 69.0 | 3.84e-01 | 94.9% | 9.5% |
| 4940192 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.76 | 67.0 | 5.87e-01 | 94.9% | 72.8% |
| 3943772 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 66.0 | 4.92e-01 | 94.9% | 43.7% |
| 5044145 | 192.2.1.3 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Rad50_zn_hook | 0.75 | 66.0 | 4.31e-01 | 94.9% | 25.4% |
| 4083451 | 192.2.1.20 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP | 0.75 | 58.0 | 5.87e-01 | 82.3% | 92.5% |
| 3485236 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.75 | 47.0 | 3.83e-01 | 91.1% | 35.7% |
| 4489485 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.72 | 61.0 | 4.41e-01 | 88.6% | 35.9% |
| 4396994 | 3755.3.1.305 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Rad50_zn_hook | 0.72 | 64.0 | 3.60e-01 | 94.9% | 20.5% |
| 3715891 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 62.0 | 4.84e-01 | 93.7% | 44.8% |
| 4025655 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.72 | 61.0 | 5.66e-01 | 93.7% | 73.7% |
| 4586838 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.72 | 66.0 | 5.19e-01 | 98.7% | 59.4% |
| 3974474 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.72 | 58.0 | 5.60e-01 | 88.6% | 83.3% |
| 5041715 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.71 | 60.0 | 5.41e-01 | 93.7% | 82.7% |
| 4248172 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.70 | 59.0 | 4.61e-01 | 88.6% | 45.2% |
| 5032886 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.70 | 58.0 | 3.40e-01 | 93.7% | 10.7% |
| 5050732 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.70 | 63.0 | 5.42e-01 | 98.7% | 65.8% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.69 | 59.0 | 5.67e-01 | 93.7% | 85.6% |
| 4950970 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 58.0 | 3.69e-01 | 93.7% | 19.2% |
| 3182634 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.69 | 52.0 | 4.96e-01 | 78.5% | 70.0% |
| 3768341 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 58.0 | 4.19e-01 | 93.7% | 35.1% |
| 4020727 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 43.0 | 3.72e-01 | 83.5% | 40.8% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.67 | 57.0 | 4.94e-01 | 93.7% | 63.3% |
| 5028061 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.66 | 55.0 | 5.33e-01 | 93.7% | 81.1% |
| 3693835 | 601.1.1.90 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF3433 | 0.64 | 49.0 | 3.89e-01 | 83.5% | 98.2% |
| 3970671 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.64 | 52.0 | 5.30e-01 | 89.9% | 96.0% |
| None | — | 0.63 | 58.0 | 4.13e-01 | 98.7% | 54.1% | |
| 5018039 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.63 | 58.0 | 5.05e-01 | 100.0% | 68.7% |
| 4648944 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.63 | 47.0 | 3.44e-01 | 97.5% | 29.3% |
| 4987009 | 3837.1.1.1 ↗ | alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 | 0.63 | 54.0 | 4.44e-01 | 98.7% | 92.0% |
| 3493963 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 51.0 | 4.79e-01 | 93.7% | 73.0% |
| 3164240 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.62 | 33.0 | 3.47e-01 | 77.2% | 55.7% |
| 4098159 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.60 | 55.0 | 3.71e-01 | 98.7% | 53.9% |
| 5082792 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.59 | 44.0 | 3.58e-01 | 78.5% | 100.0% |
| 3421052 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.59 | 50.0 | 3.67e-01 | 98.7% | 33.2% |
| 5072220 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.56 | 42.0 | 3.49e-01 | 81.0% | 97.9% |
| 4986929 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.55 | 40.0 | 3.30e-01 | 75.9% | 97.9% |
| 3732352 | 601.39.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › Enhancer of filamentation 1 › Enhancer of filamentation 1 › DUF3433 | 0.55 | 46.0 | 3.60e-01 | 92.4% | 46.9% |
| 3946654 | 517.2.1.0 ↗ | beta barrels › CBF-like › TraF › TraF | 0.55 | 47.0 | 3.32e-01 | 100.0% | 63.6% |
| 5049933 | 1075.1.1.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 | 0.55 | 47.0 | 3.28e-01 | 98.7% | 51.0% |
| 3483809 | 3704.1.1.0 ↗ | alpha superhelices › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain | 0.54 | 38.0 | 3.02e-01 | 73.4% | 61.3% |
| 3556431 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.54 | 48.0 | 3.90e-01 | 100.0% | 99.3% |
| 4270026 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.54 | 44.0 | 3.21e-01 | 100.0% | 96.4% |
| 5071300 | 601.27.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like | 0.50 | 45.0 | 3.45e-01 | 98.7% | 74.4% |