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IMGVR_UViG_2791355071_000001-2791355071-2792536179
Arc-VirIMGVR_UViG_2791355071_000001-2791355071-2792536179
Identity
- Kingdom:
- archaea
Quality
71.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-49
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g7nB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.77 | 51.0 | 3.04e-01 | 100.0% | 9.7% |
| 1wg1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.74 | 50.0 | 3.99e-01 | 100.0% | 36.6% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.66 | 55.0 | 3.21e-01 | 100.0% | 18.3% |
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 47.0 | 3.33e-01 | 94.6% | 24.4% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.63 | 43.0 | 3.29e-01 | 94.6% | 28.6% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 50.0 | 3.94e-01 | 100.0% | 42.2% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.61 | 45.0 | 2.88e-01 | 100.0% | 21.6% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.61 | 50.0 | 3.83e-01 | 100.0% | 38.9% |
| 2nraC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 3.02e-01 | 83.8% | 80.7% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.58 | 43.0 | 3.93e-01 | 100.0% | 61.9% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.56 | 42.0 | 2.77e-01 | 100.0% | 17.9% |
| 1hkqA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 48.0 | 3.28e-01 | 97.3% | 77.6% |
| 6fezA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 38.0 | 2.97e-01 | 100.0% | 30.9% |
| 4yy8A02 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.54 | 37.0 | 2.30e-01 | 78.4% | 34.2% |
| 2ichA02 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.54 | 41.0 | 3.00e-01 | 97.3% | 35.4% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.54 | 39.0 | 2.57e-01 | 100.0% | 15.5% |
| 7qzqA01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.53 | 42.0 | 2.51e-01 | 97.3% | 21.0% |
| 2yfsA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 39.0 | 2.27e-01 | 91.9% | 20.5% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 40.0 | 3.42e-01 | 100.0% | 52.7% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 35.0 | 3.25e-01 | 89.2% | 48.2% |
| 5tnvA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 41.0 | 2.45e-01 | 89.2% | 47.4% |
| 3rhtA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 37.0 | 2.45e-01 | 100.0% | 38.9% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.52 | 36.0 | 2.42e-01 | 89.2% | 35.5% |
| 4l8nA03 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 39.0 | 2.72e-01 | 97.3% | 41.5% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.16e-01 | 94.6% | 41.2% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.50 | 35.0 | 2.26e-01 | 81.1% | 48.5% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3359944 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.83 | 48.0 | 4.10e-01 | 100.0% | 38.2% |
| 3332869 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.77 | 47.0 | 4.28e-01 | 100.0% | 44.0% |
| 3260945 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 59.0 | 5.23e-01 | 100.0% | 63.3% |
| 4942677 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 57.0 | 4.61e-01 | 100.0% | 57.3% |
| 4162586 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 58.0 | 3.25e-01 | 100.0% | 12.0% |
| 3515089 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.66 | 47.0 | 3.84e-01 | 100.0% | 41.2% |
| 1214535 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.66 | 47.0 | 4.04e-01 | 97.3% | 46.8% |
| 3776456 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.63 | 52.0 | 4.13e-01 | 100.0% | 58.3% |
| 3210653 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.24e-01 | 100.0% | 55.4% |
| 4342003 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.60 | 46.0 | 3.69e-01 | 100.0% | 41.2% |
| 3256977 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 50.0 | 3.06e-01 | 100.0% | 18.8% |
| 3671328 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.58 | 46.0 | 3.32e-01 | 89.2% | 37.3% |
| 4532642 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.58 | 40.0 | 3.44e-01 | 94.6% | 41.4% |
| 4964141 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.58 | 45.0 | 3.63e-01 | 100.0% | 42.2% |
| 4854091 | 3174.1.1.2 ↗ | beta barrels › Ribosomal protein L14-like › Ribosomal protein L14-related › Ribosomal protein L14-related › Ribosomal_S8e | 0.56 | 46.0 | 3.02e-01 | 100.0% | 25.3% |
| 3599077 | 3174.1.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Ribosomal protein L14-related › Ribosomal protein L14-related | 0.56 | 47.0 | 2.99e-01 | 100.0% | 23.1% |
| 4936151 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.56 | 36.0 | 2.40e-01 | 100.0% | 11.9% |
| 4833000 | 3174.1.1.2 ↗ | beta barrels › Ribosomal protein L14-like › Ribosomal protein L14-related › Ribosomal protein L14-related › Ribosomal_S8e | 0.55 | 46.0 | 3.26e-01 | 100.0% | 37.5% |
| 4970531 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.55 | 42.0 | 2.51e-01 | 100.0% | 36.4% |
| 3327738 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 38.0 | 2.45e-01 | 100.0% | 14.5% |
| 3724525 | 4317.1.1.0 ↗ | a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like | 0.54 | 45.0 | 4.10e-01 | 94.6% | 95.9% |
| 5027324 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.54 | 41.0 | 2.38e-01 | 83.8% | 30.5% |
| 3993494 | 5.1.5.42 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RMC1_N | 0.54 | 46.0 | 2.71e-01 | 100.0% | 15.1% |
| 4487977 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.54 | 36.0 | 2.21e-01 | 89.2% | 39.7% |
| 3408808 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.53 | 41.0 | 2.67e-01 | 100.0% | 17.3% |
| 4938763 | 294.2.1.0 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › Penicillin-binding protein 2x (pbp-2x)-C › Penicillin-binding protein 2x (pbp-2x)-C | 0.53 | 46.0 | 3.69e-01 | 100.0% | 82.7% |
| 4964147 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.52 | 42.0 | 3.26e-01 | 100.0% | 81.1% |
| 4995715 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 42.0 | 2.58e-01 | 100.0% | 89.8% |