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IMGVR_UViG_2791355071_000004-2791355071-2792538194
Arc-VirIMGVR_UViG_2791355071_000004-2791355071-2792538194
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-136
Domain cluster:
rep: IMGVR_UViG_3300030091_000003-3300030091-Ga0188179_1035714__D17-102
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vr9A02 | 3.10.20.750 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 37.0 | 4.62e-01 | 80.2% | 100.0% |
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.65 | 33.0 | 4.38e-01 | 89.6% | 92.7% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 47.0 | 4.32e-01 | 92.5% | 63.2% |
| 2w8mA00 | 3.40.1350.50 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › D212 PD-(D/E)XK nuclease, catalytic motif | 0.60 | 51.0 | 4.42e-01 | 92.5% | 60.6% |
| 4esjA01 | 3.40.210.30 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain | 0.60 | 52.0 | 4.63e-01 | 97.2% | 67.3% |
| 5dnoA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.58 | 52.0 | 4.55e-01 | 100.0% | 66.5% |
| 4lqeA00 | 3.40.1350.140 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like | 0.58 | 51.0 | 4.56e-01 | 96.2% | 77.2% |
| 4rcjA01 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.58 | 50.0 | 4.56e-01 | 97.2% | 76.0% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.58 | 28.0 | 3.72e-01 | 81.1% | 100.0% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.57 | 42.0 | 3.78e-01 | 99.1% | 55.5% |
| 2i00C01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 36.0 | 3.25e-01 | 93.4% | 47.9% |
| 2b7uA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.55 | 43.0 | 3.68e-01 | 93.4% | 53.4% |
| 1lrzA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 34.0 | 3.09e-01 | 94.3% | 47.6% |
| 2k6hA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.52 | 41.0 | 3.55e-01 | 94.3% | 53.3% |
| 4cooA03 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 45.0 | 4.12e-01 | 97.2% | 73.7% |
| 2p9mB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 45.0 | 4.24e-01 | 96.2% | 81.4% |
| 3fv6A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 44.0 | 4.02e-01 | 96.2% | 77.2% |
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 33.0 | 3.43e-01 | 96.2% | 71.6% |
| 2rihA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 45.0 | 4.19e-01 | 97.2% | 83.2% |
| 3ddjA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 44.0 | 4.00e-01 | 96.2% | 78.3% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.50 | 41.0 | 4.02e-01 | 99.1% | 80.8% |
| 1xkfB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.50 | 43.0 | 4.16e-01 | 96.2% | 85.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3216932 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 49.0 | 3.40e-01 | 81.1% | 21.6% |
| 5013306 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 62.0 | 5.49e-01 | 98.1% | 72.9% |
| 4977491 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.69 | 54.0 | 5.15e-01 | 98.1% | 71.2% |
| 1837447 | 2008.1.1.56 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_5 | 0.63 | 49.0 | 4.46e-01 | 92.5% | 63.0% |
| 1503110 | 2008.1.1.21 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnI | 0.60 | 52.0 | 4.49e-01 | 97.2% | 62.2% |
| 5030597 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 50.0 | 4.33e-01 | 92.5% | 60.6% |
| 1146578 | 2008.1.1.33 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MepB-like | 0.58 | 51.0 | 4.56e-01 | 96.2% | 77.2% |
| 4009644 | 2008.1.1.160 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27151 | 0.55 | 43.0 | 3.69e-01 | 97.2% | 51.4% |
| 4381486 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 41.0 | 4.44e-01 | 92.5% | 94.3% |
| 5075341 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.54 | 47.0 | 3.90e-01 | 98.1% | 61.5% |
| 4985846 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 47.0 | 4.37e-01 | 97.2% | 80.7% |
| 3952801 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.53 | 46.0 | 4.14e-01 | 97.2% | 85.3% |
| 5010141 | 4052.1.1.1 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA_dh_M | 0.52 | 43.0 | 4.18e-01 | 89.6% | 95.8% |
| 4951216 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 45.0 | 4.01e-01 | 96.2% | 83.8% |
| 3781580 | 5104.1.1.2 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › CDC45 | 0.52 | 42.0 | 4.14e-01 | 99.1% | 79.8% |
| 5016411 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.52 | 43.0 | 4.18e-01 | 97.2% | 79.8% |
| 5051114 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.52 | 42.0 | 4.16e-01 | 100.0% | 82.7% |
| 3957291 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.52 | 39.0 | 4.33e-01 | 91.5% | 100.0% |
| 3222006 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.52 | 40.0 | 4.14e-01 | 92.5% | 87.0% |
| 4943624 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 44.0 | 4.30e-01 | 96.2% | 86.1% |
| 3948686 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 44.0 | 4.05e-01 | 96.2% | 76.3% |
| 5070153 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.50 | 39.0 | 3.86e-01 | 100.0% | 76.5% |
| 5078398 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 43.0 | 3.90e-01 | 96.2% | 74.7% |