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IMGVR_UViG_2791355073_000001-2791355073-2792544868
Arc-VirIMGVR_UViG_2791355073_000001-2791355073-2792544868
Identity
- Kingdom:
- archaea
Quality
72.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-77
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cc2A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 47.0 | 4.65e-01 | 79.3% | 96.8% |
| 2jneA00 | 2.10.290.10 | Mainly Beta › Ribbon › Rubredoxin-like › YfgJ-like | 0.61 | 48.0 | 4.57e-01 | 89.7% | 77.5% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 47.0 | 4.78e-01 | 98.3% | 91.1% |
| 2atcB02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.60 | 47.0 | 4.91e-01 | 93.1% | 98.1% |
| 1awoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 45.0 | 4.58e-01 | 86.2% | 100.0% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.59 | 42.0 | 4.14e-01 | 74.1% | 87.1% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 4.54e-01 | 98.3% | 80.0% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.02e-01 | 98.3% | 61.3% |
| 2dlpA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 43.0 | 3.88e-01 | 82.8% | 71.8% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 48.0 | 4.76e-01 | 98.3% | 98.4% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 44.0 | 4.39e-01 | 94.8% | 84.1% |
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 45.0 | 4.45e-01 | 94.8% | 93.8% |
| 3h6zA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 46.0 | 3.85e-01 | 100.0% | 54.5% |
| 3nmzD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 44.0 | 4.01e-01 | 94.8% | 82.1% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 44.0 | 4.14e-01 | 94.8% | 74.0% |
| 1x4rA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.54 | 41.0 | 3.83e-01 | 87.9% | 92.4% |
| 5flxf00 | 6.20.50.150 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.54 | 38.0 | 3.59e-01 | 75.9% | 64.4% |
| 5w5yB08 | 3.90.1800.10 | Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain | 0.54 | 39.0 | 3.07e-01 | 81.0% | 79.9% |
| 3afhA02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.53 | 36.0 | 3.02e-01 | 87.9% | 39.4% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.53 | 35.0 | 3.36e-01 | 70.7% | 62.5% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 44.0 | 4.47e-01 | 98.3% | 98.2% |
| 3pz8C00 | 2.40.240.130 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.52 | 44.0 | 3.97e-01 | 100.0% | 70.4% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.51 | 41.0 | 4.11e-01 | 100.0% | 89.8% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 38.0 | 4.05e-01 | 87.9% | 100.0% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 40.0 | 3.97e-01 | 93.1% | 96.8% |
| 6uy8A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 41.0 | 4.13e-01 | 98.3% | 100.0% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4963432 | 4076.2.1.7 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF5817 | 0.65 | 46.0 | 4.08e-01 | 87.9% | 51.8% |
| 4962603 | 4.26.1.9 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › CPxCG_zf | 0.64 | 46.0 | 5.03e-01 | 96.6% | 100.0% |
| 3578824 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 46.0 | 4.02e-01 | 91.4% | 50.0% |
| 3638416 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.64 | 47.0 | 4.84e-01 | 82.8% | 85.5% |
| 4680376 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.64 | 48.0 | 4.95e-01 | 94.8% | 87.3% |
| 5002125 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.63 | 44.0 | 4.41e-01 | 87.9% | 71.7% |
| 4969991 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.63 | 43.0 | 4.60e-01 | 82.8% | 91.1% |
| 5002755 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.62 | 45.0 | 4.85e-01 | 96.6% | 100.0% |
| 3924149 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 49.0 | 5.14e-01 | 98.3% | 100.0% |
| 3925408 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 48.0 | 5.04e-01 | 96.6% | 100.0% |
| 5041477 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.61 | 42.0 | 4.21e-01 | 89.7% | 71.7% |
| 3991244 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.61 | 43.0 | 4.69e-01 | 82.8% | 97.8% |
| 3502388 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 49.0 | 4.52e-01 | 93.1% | 70.7% |
| 3502290 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 48.0 | 4.80e-01 | 94.8% | 90.0% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.60 | 49.0 | 4.80e-01 | 93.1% | 83.1% |
| 3243949 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.59 | 50.0 | 4.95e-01 | 94.8% | 98.3% |
| 3737810 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 50.0 | 4.76e-01 | 96.6% | 84.1% |
| 3236689 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 47.0 | 4.78e-01 | 91.4% | 94.5% |
| 3510676 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 3.93e-01 | 100.0% | 53.7% |
| 3931993 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 4.70e-01 | 93.1% | 88.3% |
| 3926017 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 49.0 | 4.98e-01 | 100.0% | 100.0% |
| 3955489 | 2484.1.1.211 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605, Cas12f1-like_TNB | 0.58 | 43.0 | 3.00e-01 | 82.8% | 47.1% |
| 3927663 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 49.0 | 4.79e-01 | 100.0% | 87.7% |
| 4343301 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 48.0 | 4.01e-01 | 96.6% | 76.2% |
| 3494359 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 47.0 | 4.57e-01 | 96.6% | 84.4% |
| 142250 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.57 | 46.0 | 4.47e-01 | 93.1% | 95.4% |
| 3554994 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.57 | 44.0 | 3.94e-01 | 89.7% | 75.3% |
| 3865962 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.57 | 39.0 | 2.82e-01 | 84.5% | 23.2% |
| 3475881 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 45.0 | 4.31e-01 | 93.1% | 91.4% |
| 4185726 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.56 | 37.0 | 3.99e-01 | 84.5% | 91.1% |
| 3472332 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 4.35e-01 | 98.3% | 92.7% |
| 3168651 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.55 | 37.0 | 3.91e-01 | 74.1% | 80.0% |
| 3854638 | 4.1.1.131 ↗ | beta barrels › SH3 › SH3 › SH3 › MLVIN_C | 0.55 | 45.0 | 3.86e-01 | 94.8% | 55.0% |
| 3881967 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.55 | 46.0 | 4.21e-01 | 96.6% | 72.5% |
| 3415237 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 3.15e-01 | 96.6% | 40.5% |
| 3484620 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.54 | 44.0 | 3.82e-01 | 94.8% | 85.3% |
| 2595997 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.54 | 37.0 | 3.52e-01 | 79.3% | 58.9% |
| 3240279 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.53 | 44.0 | 3.99e-01 | 96.6% | 72.9% |
| 3177365 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 42.0 | 4.18e-01 | 93.1% | 88.3% |
| 2756510 | 4.1.1.131 ↗ | beta barrels › SH3 › SH3 › SH3 › MLVIN_C | 0.53 | 43.0 | 3.82e-01 | 94.8% | 60.7% |
| 4483819 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.53 | 42.0 | 4.04e-01 | 91.4% | 84.3% |
| 3332613 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.53 | 44.0 | 3.57e-01 | 98.3% | 54.2% |
| 3496803 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 42.0 | 3.27e-01 | 98.3% | 97.5% |
| 3225707 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.52 | 44.0 | 4.18e-01 | 96.6% | 82.9% |
| 3688315 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 37.0 | 3.89e-01 | 75.9% | 88.0% |
| 3393161 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.51 | 37.0 | 2.53e-01 | 79.3% | 76.7% |
| 4134876 | 4.1.1.334 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 | 0.51 | 41.0 | 3.05e-01 | 91.4% | 40.0% |
| 3503782 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.51 | 42.0 | 4.18e-01 | 96.6% | 95.0% |
| 3269589 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.50 | 40.0 | 3.83e-01 | 91.4% | 81.4% |