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IMGVR_UViG_2791355073_000002-2791355073-2792546696
Arc-VirIMGVR_UViG_2791355073_000002-2791355073-2792546696
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-162
Domain cluster:
rep: IMGVR_UViG_2883595994_000001-2883595994-2883597018__D25-173
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o5aA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 28.0 | 3.46e-01 | 89.2% | 79.4% |
| 2id1A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 28.0 | 3.44e-01 | 88.6% | 80.8% |
| 1extA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.50 | 18.0 | 2.41e-01 | 86.1% | 54.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017025 | 604.12.1.63 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ECF_trnsprt | 0.69 | 31.0 | 2.98e-01 | 100.0% | 36.2% |
| 4950386 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.63 | 33.0 | 4.02e-01 | 96.2% | 78.0% |
| 5019841 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 20.0 | 2.73e-01 | 89.2% | 61.3% |
| 4999943 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.54 | 38.0 | 4.18e-01 | 100.0% | 90.4% |
| 5033486 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.51 | 36.0 | 3.78e-01 | 100.0% | 80.0% |