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IMGVR_UViG_2799112904_000001-2799112904-2800861693

Arc-Vir

IMGVR_UViG_2799112904_000001-2799112904-2800861693

Identity

Kingdom:
archaea

Quality

87.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-53
PDB
Domain cluster: representative
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4i14A02 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.80 55.0 4.09e-01 71.7% 81.0%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.78 66.0 5.95e-01 92.5% 97.2%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 67.0 6.27e-01 98.1% 89.2%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.75 64.0 5.82e-01 100.0% 81.3%
2bz0A00 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.75 54.0 3.80e-01 77.4% 81.5%
3k59A01 2.40.50.590 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel 0.74 58.0 4.93e-01 84.9% 90.6%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 66.0 5.98e-01 100.0% 88.9%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.74e-01 98.1% 82.7%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.73 52.0 4.13e-01 75.5% 76.4%
1gm5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 54.0 4.48e-01 84.9% 77.5%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 5.80e-01 98.1% 90.5%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 57.0 5.17e-01 88.7% 71.8%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.70 63.0 5.62e-01 100.0% 97.3%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.66e-01 98.1% 84.6%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.70 49.0 3.49e-01 73.6% 84.1%
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 55.0 5.17e-01 88.7% 87.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.63e-01 100.0% 85.5%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 59.0 5.44e-01 100.0% 85.7%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.69 47.0 3.96e-01 81.1% 42.2%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 5.67e-01 100.0% 86.7%
1whjA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.68 58.0 4.76e-01 98.1% 68.6%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 54.0 3.26e-01 90.6% 37.6%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 51.0 4.29e-01 84.9% 88.7%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.67 47.0 3.40e-01 73.6% 48.3%
1qypA00 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.67 51.0 5.00e-01 83.0% 78.9%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.66 57.0 4.38e-01 98.1% 65.3%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 51.0 3.36e-01 90.6% 32.4%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 51.0 4.52e-01 88.7% 64.2%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 52.0 3.12e-01 92.5% 35.7%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.05e-01 100.0% 41.7%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 51.0 5.02e-01 96.2% 89.8%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.64 49.0 3.87e-01 86.8% 73.6%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 4.11e-01 100.0% 52.3%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.87e-01 100.0% 86.3%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.63 53.0 4.40e-01 100.0% 78.8%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 5.11e-01 94.3% 100.0%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.62 45.0 3.35e-01 79.2% 93.7%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 52.0 4.05e-01 100.0% 78.5%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.60 45.0 3.27e-01 83.0% 75.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 4.78e-01 96.2% 100.0%
7vljA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 41.0 3.49e-01 73.6% 100.0%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 43.0 4.02e-01 81.1% 80.3%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.01e-01 100.0% 56.0%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 44.0 3.73e-01 84.9% 66.0%
3hi2B00 3.30.2310.40 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › 0.58 45.0 3.77e-01 86.8% 99.0%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 47.0 3.97e-01 100.0% 68.0%
1sqiA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 44.0 3.14e-01 86.8% 27.5%
1r0uA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 46.0 3.44e-01 90.6% 54.2%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 41.0 2.55e-01 79.2% 34.5%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 45.0 3.57e-01 90.6% 82.5%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 40.0 3.62e-01 77.4% 71.8%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 45.0 3.41e-01 100.0% 81.9%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 44.0 3.44e-01 98.1% 89.3%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 48.0 4.62e-01 96.2% 87.1%
3ossC00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.31e-01 92.5% 95.4%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.56 42.0 3.54e-01 86.8% 48.5%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.56 44.0 4.25e-01 90.6% 82.5%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.55 47.0 3.52e-01 98.1% 84.3%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 39.0 3.65e-01 77.4% 80.3%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 3.52e-01 88.7% 77.7%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.55 38.0 2.90e-01 75.5% 97.9%
6u7jA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.28e-01 75.5% 75.3%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 45.0 3.15e-01 100.0% 63.5%
2qggA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.54 43.0 3.80e-01 100.0% 84.9%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.54 46.0 3.90e-01 98.1% 82.6%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 45.0 4.13e-01 96.2% 91.5%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 39.0 3.61e-01 81.1% 81.9%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.53 40.0 4.11e-01 83.0% 95.8%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 43.0 2.76e-01 92.5% 29.0%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.53 44.0 3.65e-01 98.1% 86.3%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.53 39.0 2.96e-01 83.0% 71.1%
1bihA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.27e-01 86.8% 73.6%
1gbgA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 2.71e-01 86.8% 74.8%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 3.14e-01 98.1% 74.4%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 41.0 2.69e-01 92.5% 30.7%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.51 43.0 3.57e-01 100.0% 66.0%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 42.0 2.87e-01 100.0% 57.4%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944596 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.85 77.0 5.76e-01 100.0% 62.4%
5012425 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.84 75.0 5.48e-01 100.0% 58.6%
3934278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 72.0 5.54e-01 98.1% 60.9%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.81 72.0 6.76e-01 100.0% 89.2%
3967986 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.80 71.0 6.19e-01 100.0% 88.7%
4976092 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 69.0 5.85e-01 100.0% 68.9%
4168653 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.79 69.0 7.16e-01 94.3% 100.0%
3739064 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 71.0 6.65e-01 100.0% 95.4%
4306285 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 70.0 6.39e-01 100.0% 82.9%
5043498 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.78 59.0 3.51e-01 83.0% 88.7%
4015757 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 68.0 4.51e-01 100.0% 36.2%
3720660 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 5.93e-01 96.2% 82.7%
3784770 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.77 66.0 5.91e-01 96.2% 94.7%
4941620 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 67.0 6.47e-01 98.1% 90.0%
4427477 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 67.0 5.55e-01 100.0% 69.5%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.75 64.0 5.63e-01 96.2% 72.5%
1112010 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.75 64.0 5.82e-01 100.0% 81.3%
3924619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.05e-01 98.1% 55.0%
3279470 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.75 66.0 5.53e-01 100.0% 65.6%
3961706 4.1.1.161 beta barrels › SH3 › SH3 › SH3 › DUF4178 0.74 61.0 5.69e-01 90.6% 84.6%
4335022 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 60.0 5.08e-01 94.3% 71.6%
3942912 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.74 63.0 5.49e-01 100.0% 76.5%
3963927 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.73 58.0 4.56e-01 86.8% 85.5%
591 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.73 64.0 5.70e-01 98.1% 81.6%
4977206 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 62.0 6.01e-01 100.0% 86.7%
3978997 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.73 63.0 5.27e-01 100.0% 68.4%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.73 64.0 5.71e-01 98.1% 76.0%
3959770 4.31.1.0 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 0.73 62.0 5.31e-01 100.0% 72.2%
4052975 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.73 57.0 4.52e-01 86.8% 86.4%
5039400 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.73 51.0 3.12e-01 73.6% 86.0%
5056127 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.72 51.0 2.93e-01 77.4% 8.0%
4545520 4.7.1.7 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.72 61.0 5.35e-01 100.0% 77.6%
3953109 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.72 61.0 5.17e-01 100.0% 69.5%
5035742 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 64.0 6.14e-01 100.0% 95.0%
4946993 4.1.1.479 beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.72 63.0 5.75e-01 100.0% 85.7%
4124092 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.80e-01 100.0% 87.1%
3519122 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.71 60.0 5.19e-01 100.0% 71.1%
4051081 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.71 63.0 6.05e-01 100.0% 98.3%
4851967 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.71 59.0 5.67e-01 98.1% 95.2%
4045576 4.1.1.161 beta barrels › SH3 › SH3 › SH3 › DUF4178 0.71 61.0 5.80e-01 100.0% 93.8%
3587082 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 56.0 5.57e-01 86.8% 87.0%
4031510 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.06e-01 100.0% 70.0%
4931072 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.70 61.0 5.60e-01 100.0% 85.7%
1140900 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.70 56.0 5.41e-01 88.7% 98.3%
5053929 7512.1.1.24 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 0.70 50.0 3.26e-01 77.4% 25.8%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.70 58.0 4.74e-01 100.0% 60.9%
4938919 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.64e-01 98.1% 86.2%
1557343 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.69 59.0 5.44e-01 100.0% 85.7%
4335575 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 56.0 3.09e-01 100.0% 7.1%
3951961 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.68 56.0 4.81e-01 100.0% 68.4%
4426175 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.68 53.0 4.84e-01 88.7% 62.9%
3936608 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 56.0 4.54e-01 98.1% 76.4%
4243492 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.67 55.0 5.29e-01 90.6% 86.7%
2674741 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.67 52.0 5.20e-01 90.6% 90.9%
3932647 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 55.0 4.87e-01 100.0% 76.5%
3821751 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.66 56.0 4.98e-01 100.0% 73.8%
4547406 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.66 54.0 4.88e-01 100.0% 70.0%
4130753 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.66 52.0 3.20e-01 90.6% 24.9%
3952804 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.66 52.0 5.17e-01 86.8% 85.5%
5073192 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.66 52.0 4.88e-01 86.8% 86.2%
3839369 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.66 54.0 4.87e-01 100.0% 70.0%
4423306 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.66 56.0 5.10e-01 100.0% 76.0%
3251559 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.35e-01 92.5% 100.0%
3943423 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.65 50.0 4.81e-01 86.8% 73.3%
3388362 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 54.0 3.04e-01 100.0% 8.2%
4339993 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.65 53.0 4.63e-01 100.0% 62.2%
4033432 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.65 51.0 4.98e-01 88.7% 85.0%
4068131 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.65 53.0 4.59e-01 100.0% 58.9%
3609256 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 4.78e-01 100.0% 80.0%
4549410 506.2.1.0 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain 0.64 52.0 2.91e-01 100.0% 6.3%
3409587 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 52.0 4.58e-01 100.0% 64.4%
4985735 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.64 45.0 3.85e-01 77.4% 77.9%
4077893 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 52.0 3.07e-01 100.0% 10.6%
3622139 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 52.0 4.57e-01 100.0% 62.2%
3744121 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.63 50.0 3.00e-01 88.7% 21.6%
4030120 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 55.0 3.18e-01 100.0% 22.2%
4026958 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 51.0 5.07e-01 98.1% 94.5%
4941649 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 54.0 4.51e-01 100.0% 77.9%
3284535 295.1.1.13 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3090 0.60 45.0 3.54e-01 81.1% 59.2%
3974126 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.59 49.0 3.44e-01 100.0% 65.2%
3286982 330.6.1.0 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.57 45.0 3.75e-01 92.5% 57.7%
3304346 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 42.0 3.91e-01 83.0% 82.9%
3574976 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.57 38.0 3.83e-01 86.8% 69.1%
3314422 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.55 41.0 3.82e-01 83.0% 82.9%
3427749 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.55 46.0 4.37e-01 96.2% 83.1%
3608754 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.55 46.0 3.10e-01 98.1% 91.1%
5067458 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 41.0 4.09e-01 86.8% 98.2%
3482073 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 46.0 4.46e-01 98.1% 95.0%
3920675 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.54 46.0 4.11e-01 96.2% 72.0%
3941356 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.54 46.0 3.61e-01 100.0% 64.2%
3905746 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.54 45.0 4.17e-01 96.2% 77.1%
D2 medium residues 54-111
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 62.0 5.81e-01 86.2% 97.2%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 59.0 5.78e-01 86.2% 100.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 5.03e-01 74.1% 93.2%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 4.37e-01 81.0% 59.0%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 4.79e-01 81.0% 93.2%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.67 45.0 4.29e-01 70.7% 97.2%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 4.86e-01 91.4% 84.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 50.0 4.90e-01 84.5% 92.3%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 50.0 4.39e-01 82.8% 62.1%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 44.0 2.78e-01 70.7% 22.2%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 5.16e-01 82.8% 100.0%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 42.0 2.51e-01 74.1% 40.7%
1k82B01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.60 48.0 3.77e-01 89.7% 74.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 42.0 4.18e-01 77.6% 88.9%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 40.0 3.86e-01 77.6% 91.0%
3w0fA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.55 41.0 3.41e-01 84.5% 76.5%
1ha6A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 38.0 3.65e-01 74.1% 77.1%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 41.0 3.17e-01 87.9% 90.7%
3oc4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 40.0 3.19e-01 81.0% 91.7%
2ra9A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.51 35.0 3.35e-01 74.1% 87.7%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 42.0 3.12e-01 96.6% 67.9%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4936914 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.77 63.0 5.13e-01 89.7% 64.8%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 54.0 3.91e-01 75.9% 35.5%
5055039 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.74 61.0 4.54e-01 89.7% 50.7%
3588979 4.1.1.137 beta barrels › SH3 › SH3 › SH3 › PcrA_UvrD_tudor 0.73 56.0 5.63e-01 82.8% 93.2%
3713334 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 54.0 5.39e-01 79.3% 100.0%
4225207 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.73 54.0 5.37e-01 79.3% 81.7%
5066224 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.72 60.0 5.15e-01 91.4% 71.1%
2727964 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.72 52.0 5.18e-01 77.6% 96.6%
3793656 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.71 55.0 4.11e-01 84.5% 42.1%
5004462 3454.1.1.0 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like 0.71 51.0 4.47e-01 77.6% 91.1%
3555930 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.71 52.0 4.86e-01 77.6% 77.1%
3222146 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.71 53.0 5.08e-01 79.3% 84.6%
5017637 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.71 54.0 5.59e-01 82.8% 98.2%
4161673 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.70 52.0 4.59e-01 79.3% 68.2%
5032454 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.69 60.0 4.62e-01 96.6% 57.7%
4974669 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.69 57.0 4.95e-01 91.4% 64.4%
4183853 4.1.1.435 beta barrels › SH3 › SH3 › SH3 › PF29216 0.68 51.0 4.84e-01 82.8% 98.6%
3848399 4.8.1.24 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.68 54.0 5.04e-01 86.2% 91.4%
3756428 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.67 52.0 4.34e-01 84.5% 79.0%
3638174 4.1.1.320 beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.67 52.0 4.47e-01 86.2% 60.0%
4195627 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.67 49.0 4.81e-01 81.0% 86.2%
4547820 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.23e-01 84.5% 52.4%
3837995 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.60e-01 91.4% 100.0%
3278801 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.66 56.0 5.39e-01 96.6% 84.6%
5000741 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 51.0 5.01e-01 87.9% 93.8%
4975714 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 47.0 4.78e-01 75.9% 100.0%
4285199 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.65 49.0 4.23e-01 84.5% 78.9%
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 56.0 5.24e-01 96.6% 85.7%
4381526 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.64 50.0 4.73e-01 87.9% 87.1%
5044373 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 48.0 4.77e-01 87.9% 93.3%
3828749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.41e-01 91.4% 94.7%
4972872 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 42.0 4.48e-01 75.9% 100.0%
3764432 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.16e-01 81.0% 81.5%
4976896 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.58 46.0 4.05e-01 93.1% 72.6%
3584571 4.1.1.56 beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.56 41.0 2.85e-01 84.5% 23.0%
5017214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.47e-01 91.4% 100.0%
3619215 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 41.0 3.61e-01 86.2% 57.0%
3885050 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.55 41.0 3.04e-01 84.5% 31.4%
5039003 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.53 39.0 3.18e-01 79.3% 93.0%
3959450 3504.2.1.1 beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco 0.53 43.0 3.45e-01 91.4% 77.5%
None 0.53 47.0 2.74e-01 100.0% 47.8%